WormBase Tree Display for Gene: WBGene00017785
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WBGene00017785 | SMap | S_parent | Sequence | F25E5 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | try-12 | Person_evidence | WBPerson260 | |||||
Sequence_name | F25E5.4 | ||||||||
Molecular_name | F25E5.4 | ||||||||
F25E5.4.1 | |||||||||
CE32873 | |||||||||
Other_name | CELE_F25E5.4 | Accession_evidence | NDB | BX284605 | |||||
Public_name | try-12 | ||||||||
DB_info | Database | AceView | gene | 5H929C | |||||
5H929 | |||||||||
WormQTL | gene | WBGene00017785 | |||||||
WormFlux | gene | WBGene00017785 | |||||||
NDB | locus_tag | CELE_F25E5.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00017785|UniProtKB=O76652 | |||||||
family | PTHR22596 | ||||||||
NCBI | gene | 179133 | |||||||
RefSeq | protein | NM_001392547.1 | |||||||
TREEFAM | TREEFAM_ID | TF317169 | |||||||
TrEMBL | UniProtAcc | O76652 | |||||||
UniProt_GCRP | UniProtAcc | O76652 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 13 Oct 2023 01:37:05 | WBPerson51134 | Name_change | CGC_name | try-12 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | try | ||||||||
Allele (40) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (28) | |||||||||
Paralog (18) | |||||||||
Structured_description | Automated_description | Enriched in Z1.p; Z4.a; male distal tip cell; neurons; and somatic gonad precursor based on microarray; tiling array; and RNA-seq studies. Is affected by several genes including daf-2; skn-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by ten chemicals including methylmercuric chloride; rotenone; and Rifampin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Nematode trypsin-6-like family; Peptidase S1, PA clan; Chymotrypsin family Peptidase-S1; and Peptidase S1, PA clan, chymotrypsin-like fold. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F25E5.4 | |||||||
Corresponding_CDS_history | F25E5.4:wp90 | ||||||||
Corresponding_transcript | F25E5.4.1 | ||||||||
Other_sequence | CBC08681_1 | ||||||||
Associated_feature | WBsf231985 | ||||||||
Experimental_info | RNAi_result | WBRNAi00073054 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00013873 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00045507 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00089056 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00031376 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1022234 | ||||||||
Expr1149427 | |||||||||
Expr2002961 | |||||||||
Expr2021177 | |||||||||
Drives_construct | WBCnstr00027018 | ||||||||
Construct_product | WBCnstr00027018 | ||||||||
Microarray_results (20) | |||||||||
Expression_cluster (120) | |||||||||
Interaction | WBInteraction000302447 | ||||||||
WBInteraction000547888 | |||||||||
Map_info | Positive | Positive_clone | F25E5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | 0.750958 | |||||||
Method | Gene |