WormBase Tree Display for Gene: WBGene00017881
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| WBGene00017881 | SMap | S_parent | Sequence | F28A12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | asp-13 | Person_evidence | WBPerson261 | |||||
| Sequence_name | F28A12.4 | ||||||||
| Molecular_name | F28A12.4 | ||||||||
| F28A12.4.1 | |||||||||
| CE09738 | |||||||||
| Other_name | CELE_F28A12.4 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | asp-13 | ||||||||
| DB_info | Database | AceView | gene | 5J122 | |||||
| WormQTL | gene | WBGene00017881 | |||||||
| WormFlux | gene | WBGene00017881 | |||||||
| NDB | locus_tag | CELE_F28A12.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00017881|UniProtKB=Q22972 | |||||||
| family | PTHR47966 | ||||||||
| NCBI | gene | 179247 | |||||||
| RefSeq | protein | NM_072831.7 | |||||||
| TREEFAM | TREEFAM_ID | TF315800 | |||||||
| TrEMBL | UniProtAcc | Q22972 | |||||||
| UniProt_GCRP | UniProtAcc | Q22972 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 23 Nov 2012 14:10:21 | WBPerson2970 | Name_change | CGC_name | asp-13 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | asp | ||||||||
| Allele (18) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00076874 | ||||||||
| 00076875 | |||||||||
| 00076876 | |||||||||
| 00076877 | |||||||||
| 00076878 | |||||||||
| 00076879 | |||||||||
| 00076880 | |||||||||
| 00123185 | |||||||||
| 00123186 | |||||||||
| Contained_in_operon | CEOP5208 | ||||||||
| Ortholog (26) | |||||||||
| Paralog (17) | |||||||||
| Structured_description | Automated_description | Predicted to enable aspartic-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in lysosome. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F28A12.4 | |||||||
| Corresponding_transcript | F28A12.4.1 | ||||||||
| Other_sequence | CBC09928_1 | ||||||||
| CR02428 | |||||||||
| CBC09588_1 | |||||||||
| CBC00665_1 | |||||||||
| CR11450 | |||||||||
| CRC12045_1 | |||||||||
| CRC05962_1 | |||||||||
| CJC03925_1 | |||||||||
| Associated_feature (15) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00076354 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00031510 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00045774 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00045773 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00089061 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014020 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012190 | ||||||||
| Expr1037684 | |||||||||
| Expr1149685 | |||||||||
| Expr2009461 | |||||||||
| Expr2027698 | |||||||||
| Drives_construct | WBCnstr00026943 | ||||||||
| Construct_product | WBCnstr00026943 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (337) | |||||||||
| Interaction (140) | |||||||||
| Map_info | Map | V | Position | 1.52989 | |||||
| Positive | Positive_clone | F28A12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (7) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
