WormBase Tree Display for Gene: WBGene00017881
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WBGene00017881 | SMap | S_parent | Sequence | F28A12 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | asp-13 | Person_evidence | WBPerson261 | |||
Sequence_name | F28A12.4 | ||||||
Molecular_name | F28A12.4 | ||||||
F28A12.4.1 | |||||||
CE09738 | |||||||
Other_name | CELE_F28A12.4 | Accession_evidence | NDB | BX284605 | |||
Public_name | asp-13 | ||||||
DB_info | Database | AceView | gene | 5J122 | |||
WormQTL | gene | WBGene00017881 | |||||
WormFlux | gene | WBGene00017881 | |||||
NDB | locus_tag | CELE_F28A12.4 | |||||
Panther | gene | CAEEL|WormBase=WBGene00017881|UniProtKB=Q22972 | |||||
family | PTHR47966 | ||||||
NCBI | gene | 179247 | |||||
RefSeq | protein | NM_072831.7 | |||||
TREEFAM | TREEFAM_ID | TF315800 | |||||
TrEMBL | UniProtAcc | Q22972 | |||||
UniProt_GCRP | UniProtAcc | Q22972 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | asp | ||||||
Allele (18) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00076874 | ||||||
00076875 | |||||||
00076876 | |||||||
00076877 | |||||||
00076878 | |||||||
00076879 | |||||||
00076880 | |||||||
00123185 | |||||||
00123186 | |||||||
Contained_in_operon | CEOP5208 | ||||||
Ortholog (26) | |||||||
Paralog (17) | |||||||
Structured_description | Automated_description | Predicted to enable aspartic-type endopeptidase activity. Predicted to be involved in proteolysis. Predicted to be located in lysosome. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F28A12.4 | |||||
Corresponding_transcript | F28A12.4.1 | ||||||
Other_sequence | CBC09928_1 | ||||||
CR02428 | |||||||
CBC09588_1 | |||||||
CBC00665_1 | |||||||
CR11450 | |||||||
CRC12045_1 | |||||||
CRC05962_1 | |||||||
CJC03925_1 | |||||||
Associated_feature (15) | |||||||
Experimental_info | RNAi_result | WBRNAi00076354 | Inferred_automatically | RNAi_primary | |||
WBRNAi00031510 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00045774 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00045773 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00089061 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00014020 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1012190 | ||||||
Expr1037684 | |||||||
Expr1149685 | |||||||
Expr2009461 | |||||||
Expr2027698 | |||||||
Drives_construct | WBCnstr00026943 | ||||||
Construct_product | WBCnstr00026943 | ||||||
Microarray_results (19) | |||||||
Expression_cluster (337) | |||||||
Interaction (140) | |||||||
Map_info | Map | V | Position | 1.52989 | |||
Positive | Positive_clone | F28A12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00026592 | ||||||
WBPaper00028482 | |||||||
WBPaper00029197 | |||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
WBPaper00059755 | |||||||
WBPaper00065026 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |