WormBase Tree Display for Gene: WBGene00017895
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| WBGene00017895 | SMap | S_parent | Sequence | F28B12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | vrk-1 | Person_evidence | WBPerson261 | |||||
| Sequence_name | F28B12.3 | ||||||||
| Molecular_name | F28B12.3 | ||||||||
| F28B12.3.1 | |||||||||
| CE02704 | |||||||||
| F28B12.3.2 | |||||||||
| Other_name | tag-223 | Person_evidence | WBPerson201 | ||||||
| CELE_F28B12.3 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | vrk-1 | ||||||||
| DB_info | Database (14) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Dec 2004 16:59:41 | WBPerson2970 | Name_change | CGC_name | tag-223 | ||||
| 3 | 19 Aug 2005 17:46:41 | WBPerson2970 | Name_change | CGC_name | vrk-1 | ||||
| Other_name | tag-223 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | vrk | ||||||||
| Allele (44) | |||||||||
| Strain | WBStrain00035995 | ||||||||
| WBStrain00003833 | |||||||||
| WBStrain00003839 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (31) | |||||||||
| Contained_in_operon | CEOP2747 | ||||||||
| Ortholog (47) | |||||||||
| Paralog (93) | |||||||||
| Structured_description (2) | |||||||||
| Disease_info | Potential_model | DOID:0060265 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12718) | ||||
| EFO:MONDO:0015363 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12718) | ||||||
| Molecular_info | Corresponding_CDS | F28B12.3 | |||||||
| Corresponding_transcript | F28B12.3.1 | ||||||||
| F28B12.3.2 | |||||||||
| Other_sequence (13) | |||||||||
| Associated_feature | WBsf644245 | ||||||||
| WBsf657645 | |||||||||
| WBsf987996 | |||||||||
| WBsf221370 | |||||||||
| Experimental_info | RNAi_result (18) | ||||||||
| Expr_pattern (13) | |||||||||
| Drives_construct | WBCnstr00004028 | ||||||||
| WBCnstr00005735 | |||||||||
| WBCnstr00005736 | |||||||||
| WBCnstr00013241 | |||||||||
| WBCnstr00022497 | |||||||||
| WBCnstr00022498 | |||||||||
| WBCnstr00022499 | |||||||||
| WBCnstr00022500 | |||||||||
| WBCnstr00042078 | |||||||||
| Construct_product | WBCnstr00005735 | ||||||||
| WBCnstr00005736 | |||||||||
| WBCnstr00013706 | |||||||||
| WBCnstr00022497 | |||||||||
| WBCnstr00022498 | |||||||||
| WBCnstr00022499 | |||||||||
| WBCnstr00022500 | |||||||||
| WBCnstr00022501 | |||||||||
| WBCnstr00042078 | |||||||||
| Regulate_expr_cluster | WBPaper00060273:vrk-1(RNAi)_downregulated | ||||||||
| WBPaper00060273:vrk-1(RNAi)_upregulated | |||||||||
| Antibody | WBAntibody00001197 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (140) | |||||||||
| Interaction (189) | |||||||||
| Map_info | Map | II | Position | -0.846215 | Error | 0.001787 | |||
| Positive | Positive_clone | F28B12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4878 | |||||||
| Pseudo_map_position | |||||||||
| Reference (22) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
