WormBase Tree Display for Gene: WBGene00018018
expand all nodes | collapse all nodes | view schema
| WBGene00018018 | SMap | S_parent | Sequence | F33G12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F33G12.6 | |||||||
| Molecular_name | F33G12.6a | ||||||||
| F33G12.6a.1 | |||||||||
| CE32644 | |||||||||
| F33G12.6b | |||||||||
| CE37010 | |||||||||
| F33G12.6b.1 | |||||||||
| Other_name | CELE_F33G12.6 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F33G12.6 | ||||||||
| DB_info | Database | AceView | gene | 2F343 | |||||
| WormQTL | gene | WBGene00018018 | |||||||
| WormFlux | gene | WBGene00018018 | |||||||
| NDB | locus_tag | CELE_F33G12.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018018|UniProtKB=H2KZ15 | |||||||
| family | PTHR21586 | ||||||||
| NCBI | gene | 173871 | |||||||
| RefSeq | protein | NM_001381410.3 | |||||||
| NM_001026966.6 | |||||||||
| TREEFAM | TREEFAM_ID | TF312897 | |||||||
| TrEMBL | UniProtAcc | H2KZ15 | |||||||
| Q6AHN9 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KZ15 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (45) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (30) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including germ line; head ganglion; head mesodermal cell; interfacial epithelial cell; and neurons based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-12; sir-2.1; and sek-1 based on microarray; tiling array; and RNA-seq studies. Is affected by six chemicals including rotenone; metformin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: PPM-type phosphatase-like domain superfamily; Phosphorylation site; PPM-type phosphatase-like domain; and Protein phosphatase 2C. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F33G12.6a | |||||||
| F33G12.6b | |||||||||
| Corresponding_CDS_history | F33G12.6:wp88 | ||||||||
| F33G12.6:wp127 | |||||||||
| Corresponding_transcript | F33G12.6a.1 | ||||||||
| F33G12.6b.1 | |||||||||
| Other_sequence (37) | |||||||||
| Associated_feature (12) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00014255 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00046225 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025002 | ||||||||
| Expr1037765 | |||||||||
| Expr1150112 | |||||||||
| Expr2003266 | |||||||||
| Expr2021479 | |||||||||
| Drives_construct | WBCnstr00026837 | ||||||||
| Construct_product | WBCnstr00026837 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (125) | |||||||||
| Interaction (13) | |||||||||
| Map_info | Positive | Positive_clone | F33G12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -2.58485 | |||||||
| Reference | WBPaper00060275 | ||||||||
| WBPaper00062388 | |||||||||
| Method | Gene |
