WormBase Tree Display for Gene: WBGene00018034
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| WBGene00018034 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | sek-5 | Person_evidence | WBPerson1315 | |||||
| WBPerson1636 | |||||||||
| Sequence_name | F35C8.1 | ||||||||
| Molecular_name | F35C8.1 | ||||||||
| F35C8.1.1 | |||||||||
| CE45672 | |||||||||
| Other_name | CELE_F35C8.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | sek-5 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 04 Jul 2013 10:29:57 | WBPerson2970 | Name_change | CGC_name | sek-5 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | sek | ||||||||
| Allele (33) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00081193 | ||||||||
| 00081194 | |||||||||
| 00081195 | |||||||||
| 00081196 | |||||||||
| 00123293 | |||||||||
| 00123294 | |||||||||
| 00123295 | |||||||||
| Contained_in_operon | CEOPX146 | ||||||||
| Ortholog (39) | |||||||||
| Paralog (25) | |||||||||
| Structured_description | Automated_description | Predicted to enable MAP kinase kinase activity. Predicted to be involved in stress-activated MAPK cascade. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F35C8.1 | |||||||
| Corresponding_CDS_history | F35C8.1:wp141 | ||||||||
| F35C8.1:wp221 | |||||||||
| Corresponding_transcript | F35C8.1.1 | ||||||||
| Associated_feature | WBsf1005253 | ||||||||
| WBsf1022944 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00075940 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00113196 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014308 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00112966 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046308 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1025207 | ||||||||
| Expr1150196 | |||||||||
| Expr2033959 | |||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (26) | |||||||||
| SAGE_tag | SAGE:aagatatgaa | Strand | Antisense | ||||||
| SAGE:gcttgatgaccttttct | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:gagcacaccc | Strand | Antisense | |||||||
| SAGE:gcttgatgac | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:gaagaaatgg | Strand | Sense | |||||||
| Unambiguously_mapped | |||||||||
| SAGE:ttgctcattt | Strand | Antisense | |||||||
| SAGE:cacaaaaaat | Strand | Antisense | |||||||
| Interaction | WBInteraction000184637 | ||||||||
| WBInteraction000308935 | |||||||||
| WBInteraction000357147 | |||||||||
| WBInteraction000365186 | |||||||||
| WBInteraction000402697 | |||||||||
| WBInteraction000413878 | |||||||||
| WBInteraction000443616 | |||||||||
| WBInteraction000461061 | |||||||||
| Map_info | Map | X | Position | -5.39251 | |||||
| Positive | Positive_clone | F35C8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024295 | ||||||||
| WBPaper00027258 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
