WormBase Tree Display for Gene: WBGene00018082
expand all nodes | collapse all nodes | view schema
| WBGene00018082 | SMap | S_parent | Sequence | F36A4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F36A4.3 | |||||||
| Molecular_name | F36A4.3 | ||||||||
| F36A4.3.1 | |||||||||
| CE07179 | |||||||||
| Other_name | CELE_F36A4.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | F36A4.3 | ||||||||
| DB_info | Database | AceView | gene | 4F35 | |||||
| WormQTL | gene | WBGene00018082 | |||||||
| WormFlux | gene | WBGene00018082 | |||||||
| NDB | locus_tag | CELE_F36A4.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018082|UniProtKB=Q20094 | |||||||
| family | PTHR21479 | ||||||||
| NCBI | gene | 185340 | |||||||
| RefSeq | protein | NM_068126.2 | |||||||
| TREEFAM | TREEFAM_ID | TF322745 | |||||||
| TrEMBL | UniProtAcc | Q20094 | |||||||
| UniProt_GCRP | UniProtAcc | Q20094 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:30:59 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (19) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00209806 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | |||||
| WBGene00133304 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||||
| WBGene00129276 | Caenorhabditis japonica | From_analysis | Inparanoid_8 | ||||||
| WBGene00029280 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| WBGene00078637 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| WBGene00078893 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
| WBGene00078899 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
| chrIV_pilon.g10161 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (35) | |||||||||
| Structured_description | Automated_description | Enriched in NSM and in male based on tiling array and RNA-seq studies. Is affected by several genes including daf-2; dpy-10; and hsf-1 based on tiling array; microarray; and RNA-seq studies. Is affected by fifteen chemicals including methylmercuric chloride; D-glucose; and Rifampin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF870, Caenorhabditis species and Caenorhabditis elegans protein of unknown function (DUF870). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F36A4.3 | |||||||
| Corresponding_transcript | F36A4.3.1 | ||||||||
| Associated_feature | WBsf996229 | ||||||||
| WBsf228177 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00014395 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00046455 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031833 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023834 | ||||||||
| Expr1150324 | |||||||||
| Expr2003371 | |||||||||
| Expr2021583 | |||||||||
| Drives_construct | WBCnstr00026788 | ||||||||
| Construct_product | WBCnstr00026788 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (102) | |||||||||
| Interaction (47) | |||||||||
| Map_info | Positive | Positive_clone | F36A4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 0.0465721 | |||||||
| Method | Gene |
