WormBase Tree Display for Gene: WBGene00018223
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| WBGene00018223 | SMap | S_parent | Sequence | F40B1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | bath-13 | Person_evidence | WBPerson655 | |||||
| Sequence_name | F40B1.1 | ||||||||
| Molecular_name | F40B1.1 | ||||||||
| F40B1.1.1 | |||||||||
| CE10156 | |||||||||
| Other_name | F40B1.b | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_F40B1.1 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | bath-13 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Aug 2005 16:08:42 | WBPerson2970 | Name_change | CGC_name | bath-13 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | bath | ||||||||
| Allele (61) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (80) | |||||||||
| Paralog (82) | |||||||||
| Structured_description | Automated_description | Enriched in ABplpaaaap; ABprpaaaap; coelomocyte; germline precursor cell; and head mesodermal cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and tiling array studies. Is affected by eleven chemicals including Alovudine; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: MATH/TRAF domain; MATH domain; TRAF-like; SKP1/BTB/POZ domain superfamily; and BTB/POZ domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F40B1.1 | |||||||
| Corresponding_transcript | F40B1.1.1 | ||||||||
| Other_sequence | CBC00510_1 | ||||||||
| FD515563.1 | |||||||||
| CSC00656_1 | |||||||||
| Associated_feature | WBsf986966 | ||||||||
| WBsf986967 | |||||||||
| WBsf986968 | |||||||||
| WBsf986969 | |||||||||
| WBsf1011726 | |||||||||
| WBsf1011727 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00062239 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00046814 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00014621 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032008 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00097104 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011701 | ||||||||
| Expr1150689 | |||||||||
| Expr2009534 | |||||||||
| Expr2027771 | |||||||||
| Drives_construct | WBCnstr00026686 | ||||||||
| Construct_product | WBCnstr00026686 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (158) | |||||||||
| Interaction | WBInteraction000111287 | ||||||||
| WBInteraction000178102 | |||||||||
| WBInteraction000314418 | |||||||||
| WBInteraction000380105 | |||||||||
| WBInteraction000429515 | |||||||||
| Map_info | Map | II | Position | -12.593 | Error | 0.044864 | |||
| Positive | Positive_clone | F40B1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00060694 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
