WormBase Tree Display for Gene: WBGene00018249
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| WBGene00018249 | SMap | S_parent | Sequence | F40H3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F40H3.1 | |||||||
| Molecular_name | F40H3.1a | ||||||||
| F40H3.1a.1 | |||||||||
| CE19862 | |||||||||
| F40H3.1b | |||||||||
| CE39933 | |||||||||
| F40H3.1b.1 | |||||||||
| Other_name | CELE_F40H3.1 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F40H3.1 | ||||||||
| DB_info | Database | AceView | gene | 2G471 | |||||
| WormQTL | gene | WBGene00018249 | |||||||
| WormFlux | gene | WBGene00018249 | |||||||
| NDB | locus_tag | CELE_F40H3.1 | |||||||
| NCBI | gene | 185570 | |||||||
| RefSeq | protein | NM_001047309.3 | |||||||
| NM_001047310.3 | |||||||||
| TrEMBL | UniProtAcc | H2KZ38 | |||||||
| Q2A948 | |||||||||
| UniProt_GCRP | UniProtAcc | H2KZ38 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (86) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (29) | |||||||||
| Paralog (77) | |||||||||
| Structured_description | Automated_description | Enriched in ADE sheath cell; germline precursor cell; head mesodermal cell; and neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and fog-2 based on microarray; RNA-seq; and tiling array studies. Is affected by nine chemicals including D-glucose; Psoralens; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SKP1/BTB/POZ domain superfamily and BTB/POZ domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F40H3.1a | |||||||
| F40H3.1b | |||||||||
| Corresponding_CDS_history | F40H3.1:wp155 | ||||||||
| Corresponding_transcript | F40H3.1a.1 | ||||||||
| F40H3.1b.1 | |||||||||
| Other_sequence | EY465937.1 | ||||||||
| ACC01480_1 | |||||||||
| NBC05681_1 | |||||||||
| Oden_isotig13716 | |||||||||
| Oden_isotig13715 | |||||||||
| EY460817.1 | |||||||||
| EY467581.1 | |||||||||
| NB07235 | |||||||||
| CBC13935_1 | |||||||||
| Acan_isotig11446 | |||||||||
| Associated_feature (15) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00103350 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014696 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00046917 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032058 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1012758 | ||||||||
| Expr1037861 | |||||||||
| Expr1150787 | |||||||||
| Expr2003561 | |||||||||
| Expr2021779 | |||||||||
| Drives_construct | WBCnstr00026667 | ||||||||
| Construct_product | WBCnstr00026667 | ||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (110) | |||||||||
| Interaction (11) | |||||||||
| Map_info | Positive | Positive_clone | F40H3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -0.412081 | |||||||
| Method | Gene |
