WormBase Tree Display for Gene: WBGene00018354
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| WBGene00018354 | SMap | S_parent | Sequence | F42G2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F42G2.5 | |||||||
| Molecular_name | F42G2.5 | ||||||||
| F42G2.5.1 | |||||||||
| CE10314 | |||||||||
| Other_name | CELE_F42G2.5 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F42G2.5 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (71) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00029326 | ||||||||
| 00029327 | |||||||||
| 00029328 | |||||||||
| 00029329 | |||||||||
| 00029330 | |||||||||
| 00029331 | |||||||||
| 00029332 | |||||||||
| 00029333 | |||||||||
| 00029334 | |||||||||
| Ortholog (32) | |||||||||
| Paralog (21) | |||||||||
| Structured_description | Automated_description | Predicted to enable FFAT motif binding activity. Predicted to be involved in endoplasmic reticulum membrane organization and endoplasmic reticulum-plasma membrane tethering. Predicted to be located in endoplasmic reticulum membrane and plasma membrane. Human ortholog(s) of this gene implicated in amyotrophic lateral sclerosis type 8 and autosomal dominant adult-onset proximal spinal muscular atrophy. Is an ortholog of human VAPA (VAMP associated protein A) and VAPB (VAMP associated protein B and C). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:12377 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12649) | ||||
| DOID:332 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12649) | ||||||
| DOID:0111194 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12649) | ||||||
| DOID:0050752 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:12649) | ||||||
| Molecular_info | Corresponding_CDS | F42G2.5 | |||||||
| Corresponding_transcript | F42G2.5.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00014835 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00032145 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00076413 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047114 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00094754 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019566 | ||||||||
| Expr1150981 | |||||||||
| Expr2003646 | |||||||||
| Expr2021864 | |||||||||
| Drives_construct | WBCnstr00026586 | ||||||||
| Construct_product | WBCnstr00026586 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (156) | |||||||||
| Interaction (13) | |||||||||
| Map_info | Positive | Positive_clone | F42G2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -13.8248 | |||||||
| Reference | WBPaper00027315 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
