WormBase Tree Display for Gene: WBGene00018388
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| WBGene00018388 | SMap | S_parent | Sequence | F43C11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | F43C11.11 | |||||||
| Molecular_name | F43C11.11 | ||||||||
| F43C11.11.1 | |||||||||
| CE53959 | |||||||||
| Other_name | CELE_F43C11.11 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | F43C11.11 | ||||||||
| DB_info | Database | AceView | gene | 2C648 | |||||
| WormQTL | gene | WBGene00018388 | |||||||
| WormFlux | gene | WBGene00018388 | |||||||
| NDB | locus_tag | CELE_F43C11.11 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018388|UniProtKB=Q9U5B2 | |||||||
| family | PTHR21453 | ||||||||
| NCBI | gene | 185702 | |||||||
| RefSeq | protein | NM_001377720.1 | |||||||
| TREEFAM | TREEFAM_ID | TF322011 | |||||||
| TrEMBL | UniProtAcc | Q9U5B2 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U5B2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 23 Oct 2019 16:54:35 | WBPerson4025 | Event | Split_into | WBGene00305114 | ||||
| Split_into | WBGene00305114 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (200) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (11) | |||||||||
| Paralog (88) | |||||||||
| Structured_description | Automated_description | Enriched in ALM; BDU; and rectal epithelial cell based on single-cell RNA-seq studies. Is affected by several genes including eat-2; pgl-1; and alg-1 based on tiling array; RNA-seq; and microarray studies. Is affected by four chemicals including Rifampin; Psoralens; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: TRA-1 regulated and TRA-1 regulated protein R03H10.4. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F43C11.11 | |||||||
| Corresponding_CDS_history | F43C11.11:wp236 | ||||||||
| F43C11.11:wp274 | |||||||||
| Corresponding_transcript | F43C11.11.1 | ||||||||
| Associated_feature | WBsf986934 | ||||||||
| WBsf1011704 | |||||||||
| WBsf1011705 | |||||||||
| Experimental_info | Expr_pattern | Expr1022931 | |||||||
| Expr1151030 | |||||||||
| Expr2003662 | |||||||||
| Expr2021881 | |||||||||
| Microarray_results | SMD_F43C11_37.A | ||||||||
| 186583_at | |||||||||
| GPL14144_F43C11.11_339-398_0.925_13_A | |||||||||
| GPL19516_CGZ0021394 | |||||||||
| GPL21109_F43C11.11 | |||||||||
| GPL8673_F43C11_11P00127 | |||||||||
| GPL8673_F43C11_11P00364 | |||||||||
| GPL9450_F43C11.11 | |||||||||
| cea2.i.12386 | |||||||||
| Expression_cluster (32) | |||||||||
| Map_info | Positive | Positive_clone | F43C11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | -13.8315 | |||||||
| Method | Gene |
