WormBase Tree Display for Gene: WBGene00018392
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| WBGene00018392 | SMap | S_parent | Sequence | F43E2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | insc-1 | Person_evidence | WBPerson117 | |||||
| WBPerson2746 | |||||||||
| Sequence_name | F43E2.3 | ||||||||
| Molecular_name | F43E2.3a | ||||||||
| F43E2.3a.1 | |||||||||
| CE39370 | |||||||||
| F43E2.3b | |||||||||
| CE51957 | |||||||||
| F43E2.3a.2 | |||||||||
| F43E2.3a.3 | |||||||||
| F43E2.3b.1 | |||||||||
| Other_name | CELE_F43E2.3 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | insc-1 | ||||||||
| DB_info | Database | AceView | gene | 2H653 | |||||
| WormQTL | gene | WBGene00018392 | |||||||
| WormFlux | gene | WBGene00018392 | |||||||
| NDB | locus_tag | CELE_F43E2.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018392|UniProtKB=A0A1T5HUK5 | |||||||
| family | PTHR21386 | ||||||||
| NCBI | gene | 174205 | |||||||
| RefSeq | protein | NM_001381495.1 | |||||||
| NM_001381496.3 | |||||||||
| TrEMBL | UniProtAcc | A0A1T5HUK5 | |||||||
| O02088 | |||||||||
| UniProt_GCRP | UniProtAcc | A0A1T5HUK5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 03 Aug 2007 17:21:21 | WBPerson2970 | Name_change | CGC_name | insc-1 | ||||
| 3 | 03 Mar 2017 00:18:26 | WBPerson1983 | Event | Acquires_merge | WBGene00018396 | ||||
| Acquires_merge | WBGene00018396 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | insc | ||||||||
| Allele (55) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00002670 | ||||||||
| 00002671 | |||||||||
| 00002672 | |||||||||
| 00002673 | |||||||||
| 00002674 | |||||||||
| 00123520 | |||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Predicted to enable cytoskeletal anchor activity. Predicted to be involved in apical protein localization; establishment of mitotic spindle orientation; and regulation of asymmetric cell division. Predicted to be located in apical cortex. Expressed in several structures, including body wall musculature; hypodermis; and pharynx. Is an ortholog of human INSC (INSC spindle orientation adaptor protein). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F43E2.3a | |||||||
| F43E2.3b | |||||||||
| Corresponding_CDS_history | F43E2.3:wp86 | ||||||||
| F43E2.3:wp151 | |||||||||
| Corresponding_transcript | F43E2.3a.1 | ||||||||
| F43E2.3a.2 | |||||||||
| F43E2.3a.3 | |||||||||
| F43E2.3b.1 | |||||||||
| Other_sequence | Tcol_isotig20817 | ||||||||
| CBC04684_1 | |||||||||
| Tcir_isotig27161 | |||||||||
| HBC00243_1 | |||||||||
| Acan_isotig14823 | |||||||||
| PP00348 | |||||||||
| ES741301.1 | |||||||||
| Associated_feature | WBsf644373 | ||||||||
| WBsf644374 | |||||||||
| WBsf657823 | |||||||||
| WBsf988423 | |||||||||
| WBsf988424 | |||||||||
| WBsf221590 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00014882 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00047197 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032191 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032187 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047205 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022358 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr13595 | ||||||||
| Expr1022853 | |||||||||
| Expr1024169 | |||||||||
| Expr1037921 | |||||||||
| Expr1037924 | |||||||||
| Expr1151058 | |||||||||
| Expr1151064 | |||||||||
| Expr2012781 | |||||||||
| Expr2031020 | |||||||||
| Drives_construct | WBCnstr00026553 | ||||||||
| WBCnstr00026557 | |||||||||
| Construct_product | WBCnstr00026553 | ||||||||
| WBCnstr00026557 | |||||||||
| Microarray_results (37) | |||||||||
| Expression_cluster (156) | |||||||||
| Interaction | WBInteraction000175562 | ||||||||
| WBInteraction000197012 | |||||||||
| WBInteraction000543784 | |||||||||
| WBInteraction000543785 | |||||||||
| WBInteraction000543786 | |||||||||
| WBInteraction000543787 | |||||||||
| WBInteraction000543868 | |||||||||
| Map_info | Map | II | Position | 0.502746 | Error | 1.7e-05 | |||
| Positive | Positive_clone | F43E2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031852 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
