WormBase Tree Display for Gene: WBGene00018428

WBGene00018428 SMap: S_parent: Sequence: F44E7
  Identity: Version: 2
    Name: CGC_name: fbxa-183 Person_evidence: WBPerson655
      Sequence_name: F44E7.6
      Molecular_name: F44E7.6
        F44E7.6.1
        CE45309
      Other_name: CELE_F44E7.6 Accession_evidence: NDB BX284605
      Public_name: fbxa-183
    DB_info: Database: AceView gene 5G262
        WormQTL gene WBGene00018428
        WormFlux gene WBGene00018428
        NDB locus_tag CELE_F44E7.6
        Panther gene CAEEL|WormBase=WBGene00018428|UniProtKB=O16251
          family PTHR23015
        NCBI gene 185738
        RefSeq protein NM_072115.2
        TREEFAM TREEFAM_ID TF322479
        TrEMBL UniProtAcc O16251
        UniProt_GCRP UniProtAcc O16251
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:00 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 01 Mar 2007 11:55:19 WBPerson2970 Name_change: CGC_name: fbxa-183
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele (29)
    RNASeq_FPKM (74)
    Ortholog (12)
    Paralog (220)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in GABAergic neurons and excretory cell based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and pmk-1 based on tiling array; RNA-seq; and microarray studies. Is affected by eight chemicals including methylmercuric chloride; Tunicamycin; and antimycin based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box-like domain superfamily; Mos1 transposase, HTH domain; FTH domain; HTH domain in Mos1 transposase; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F44E7.6
    Corresponding_CDS_history: F44E7.6:wp218
    Corresponding_transcript: F44E7.6.1
  Experimental_info: RNAi_result: WBRNAi00082496 Inferred_automatically: RNAi_primary
      WBRNAi00014944 Inferred_automatically: RNAi_primary
      WBRNAi00014945 Inferred_automatically: RNAi_primary
      WBRNAi00047303 Inferred_automatically: RNAi_primary
      WBRNAi00082615 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1012683
      Expr1151159
      Expr2011503
      Expr2029740
    Drives_construct: WBCnstr00026524
    Construct_product: WBCnstr00026524
    Microarray_results (15)
    Expression_cluster (81)
  Map_info: Map: V Position: -0.994732 Error: 0.015775
    Positive: Positive_clone: F44E7 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene