WormBase Tree Display for Gene: WBGene00018432
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| WBGene00018432 | SMap | S_parent | Sequence | K07G6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | irld-33 | Person_evidence | WBPerson260 | |||||
| Sequence_name | F45C12.1 | ||||||||
| Molecular_name | F45C12.1 | ||||||||
| F45C12.1.1 | |||||||||
| CE10436 | |||||||||
| Other_name | K07G6.a | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_F45C12.1 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | irld-33 | ||||||||
| DB_info | Database | AceView | gene | 2C29 | |||||
| WormQTL | gene | WBGene00018432 | |||||||
| NDB | locus_tag | CELE_F45C12.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018432|UniProtKB=O16751 | |||||||
| family | PTHR21662 | ||||||||
| NCBI | gene | 24104588 | |||||||
| RefSeq | protein | NM_001306586.3 | |||||||
| TREEFAM | TREEFAM_ID | TF317243 | |||||||
| TrEMBL | UniProtAcc | O16751 | |||||||
| UniProt_GCRP | UniProtAcc | O16751 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 25 May 2012 15:57:08 | WBPerson2970 | Name_change | CGC_name | irld-33 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | irld | ||||||||
| Allele (63) | |||||||||
| Strain | WBStrain00037497 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (108) | |||||||||
| Paralog (75) | |||||||||
| Structured_description | Automated_description | Enriched in neurons based on RNA-seq studies. Is affected by several genes including eat-2; clk-1; and pgl-1 based on tiling array; microarray; and RNA-seq studies. Is affected by five chemicals including Rifampin; Psoralens; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Receptor L domain; Receptor L-domain; and Receptor L-domain superfamily. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F45C12.1 | |||||||
| Corresponding_transcript | F45C12.1.1 | ||||||||
| Associated_feature | WBsf978377 | ||||||||
| Transcription_factor | WBTranscriptionFactor000894 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00047349 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00014976 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1017192 | ||||||||
| Expr1151202 | |||||||||
| Drives_construct | WBCnstr00026520 | ||||||||
| Construct_product | WBCnstr00026520 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (39) | |||||||||
| Interaction | WBInteraction000182171 | ||||||||
| WBInteraction000199181 | |||||||||
| WBInteraction000244251 | |||||||||
| WBInteraction000279937 | |||||||||
| WBInteraction000313054 | |||||||||
| WBInteraction000339085 | |||||||||
| WBInteraction000375711 | |||||||||
| WBInteraction000392382 | |||||||||
| WBInteraction000406457 | |||||||||
| WBInteraction000416125 | |||||||||
| Map_info | Map | II | Position | -14.5164 | |||||
| Positive | Positive_clone | F45C12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
