WormBase Tree Display for Gene: WBGene00018456

WBGene00018456 SMap: S_parent: Sequence: F45D11
  Identity: Version: 2
    Name: CGC_name: fbxc-39 Person_evidence: WBPerson655
      Sequence_name: F45D11.10
      Molecular_name: F45D11.10a
        F45D11.10a.1
        CE40256
        F45D11.10b
        CE51222
        F45D11.10b.1
      Other_name: CELE_F45D11.10 Accession_evidence: NDB BX284602
      Public_name: fbxc-39
    DB_info: Database: AceView gene 2B281
        WormQTL gene WBGene00018456
        WormFlux gene WBGene00018456
        NDB locus_tag CELE_F45D11.10
        Panther gene CAEEL|WormBase=WBGene00018456|UniProtKB=Q9N5U0
          family PTHR31379
        NCBI gene 173478
        RefSeq protein NM_061475.5
            NM_001318287.3
        TrEMBL UniProtAcc A0A0S4XR62
            Q9N5U0
        UniProt_GCRP UniProtAcc Q9N5U0
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:00 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
        2 17 Jun 2008 14:44:53 WBPerson2970 Name_change: CGC_name: fbxc-39
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxc
    Allele (71)
    RNASeq_FPKM (74)
    Ortholog: WBGene00029298 Caenorhabditis briggsae From_analysis: OMA
      WBGene00068499 Caenorhabditis remanei From_analysis: OMA
      WBGene00148096 Caenorhabditis brenneri From_analysis: OMA
      WBGene00085817 Caenorhabditis remanei From_analysis: OMA
      WBGene00068180 Caenorhabditis remanei From_analysis: OMA
      WBGene00082560 Caenorhabditis remanei From_analysis: OMA
      WBGene00069488 Caenorhabditis remanei From_analysis: OMA
      WBGene00023722 Caenorhabditis briggsae From_analysis: Inparanoid_8
      WBGene00032892 Caenorhabditis briggsae From_analysis: Inparanoid_8
    Paralog (34)
    Structured_description: Automated_description: Enriched in several structures, including ABalppppaa; ABplpaappa; ABplpapapa; male distal tip cell; and somatic gonad precursor based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and proteomic studies. Is affected by ten chemicals including methylmercuric chloride; multi-walled carbon nanotube; and bisphenol S based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Protein of unknown function DUF3557 and Domain of unknown function (DUF3557). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F45D11.10a
      F45D11.10b
    Corresponding_CDS_history: F45D11.10:wp159
    Corresponding_transcript: F45D11.10a.1
      F45D11.10b.1
    Associated_feature: WBsf643947
      WBsf220810
      WBsf220811
  Experimental_info: RNAi_result: WBRNAi00000734 Inferred_automatically: RNAi_primary
      WBRNAi00032285 Inferred_automatically: RNAi_primary
      WBRNAi00047367 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1022916
      Expr1037954
      Expr1151219
      Expr2011724
      Expr2029963
    Drives_construct: WBCnstr00026504
    Construct_product: WBCnstr00026504
    Microarray_results (15)
    Expression_cluster (131)
    Interaction: WBInteraction000578774
  Map_info: Map: II Position: -15.5759
    Positive: Positive_clone: F45D11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene