WormBase Tree Display for Gene: WBGene00018466
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| WBGene00018466 | SMap | S_parent | Sequence | F45E1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F45E1.5 | |||||||
| Molecular_name | F45E1.5 | ||||||||
| F45E1.5.1 | |||||||||
| CE38519 | |||||||||
| Other_name | WP:CE38519 | Paper_evidence | WBPaper00038072 | ||||||
| CELE_F45E1.5 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | F45E1.5 | ||||||||
| DB_info | Database | AceView | gene | XI599 | |||||
| WormQTL | gene | WBGene00018466 | |||||||
| WormFlux | gene | WBGene00018466 | |||||||
| NDB | locus_tag | CELE_F45E1.5 | |||||||
| NCBI | gene | 185794 | |||||||
| RefSeq | protein | NM_076942.7 | |||||||
| TrEMBL | UniProtAcc | Q20425 | |||||||
| UniProt_GCRP | UniProtAcc | Q20425 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (69) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (12) | |||||||||
| Structured_description | Concise_description | F45E1.5 encodes a protein containing a region of similarity to carboxypeptidase A and a C-terminal coiled-coil region; phylogenetic analyses suggest that the product of F45E1.5 is a unique C. elegans EFhd (EF-hand) isoform that diverged from an efhd/aif1 precursor gene present in Bilateria. | Paper_evidence | WBPaper00038072 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 25 Aug 2011 00:00:00 | ||||||||
| Automated_description | Enriched in AFD; intestine; neurons; and sensory neurons based on RNA-seq studies. Is affected by several genes including daf-16; daf-2; and rrf-3 based on RNA-seq and microarray studies. Is affected by six chemicals including allantoin; Sirolimus; and Rifampin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F45E1.5 | |||||||
| Corresponding_CDS_history | F45E1.5:wp142 | ||||||||
| Corresponding_transcript | F45E1.5.1 | ||||||||
| Associated_feature | WBsf1006003 | ||||||||
| WBsf1023339 | |||||||||
| WBsf235996 | |||||||||
| WBsf235997 | |||||||||
| WBsf235998 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00015014 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00047388 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024917 | ||||||||
| Expr1151236 | |||||||||
| Expr2003751 | |||||||||
| Expr2021971 | |||||||||
| Drives_construct | WBCnstr00026496 | ||||||||
| Construct_product | WBCnstr00026496 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (92) | |||||||||
| Interaction | WBInteraction000115717 | ||||||||
| WBInteraction000152148 | |||||||||
| WBInteraction000183065 | |||||||||
| WBInteraction000242825 | |||||||||
| WBInteraction000302297 | |||||||||
| WBInteraction000378824 | |||||||||
| Map_info | Positive | Positive_clone | F45E1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -0.7741 | |||||||
| Reference | WBPaper00038072 | ||||||||
| Method | Gene |
