WormBase Tree Display for Gene: WBGene00018653
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| WBGene00018653 | SMap | S_parent | Sequence | F49H12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F49H12.2 | |||||||
| Molecular_name | F49H12.2 | ||||||||
| F49H12.2.1 | |||||||||
| CE53209 | |||||||||
| Other_name | CELE_F49H12.2 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | F49H12.2 | ||||||||
| DB_info | Database | AceView | gene | XC705 | |||||
| WormQTL | gene | WBGene00018653 | |||||||
| WormFlux | gene | WBGene00018653 | |||||||
| NDB | locus_tag | CELE_F49H12.2 | |||||||
| NCBI | gene | 186081 | |||||||
| RefSeq | protein | NM_001373237.3 | |||||||
| TrEMBL | UniProtAcc | Q9N5S4 | |||||||
| UniProt_GCRP | UniProtAcc | Q9N5S4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (25) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00034711 | Caenorhabditis briggsae | From_analysis | Hillier-set | |||||
| OrthoMCL | |||||||||
| WormBase-Compara | |||||||||
| WBGene00077825 | Caenorhabditis remanei | From_analysis | Inparanoid_8 | ||||||
| CSP26.g14035 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
| CSP28.g18954 | Caenorhabditis panamensis | From_analysis | WormBase-Compara | ||||||
| CSP29.g15641 | Caenorhabditis becei | From_analysis | WormBase-Compara | ||||||
| Csp11.Scaffold629.g16559 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
| Csp5_scaffold_00179.g6385 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
| GCK72_024001 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||||
| chrX_pilon.g18561 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in body wall muscle cell; coelomocyte; neurons; and retrovesicular ganglion based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including age-1; daf-12; and eat-2 based on microarray; tiling array; and RNA-seq studies. Is affected by five chemicals including methylmercuric chloride; Psoralens; and allantoin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F49H12.2 | |||||||
| Corresponding_CDS_history | F49H12.2:wp271 | ||||||||
| Corresponding_transcript | F49H12.2.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00047887 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015350 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047886 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024477 | ||||||||
| Expr1151717 | |||||||||
| Expr2003958 | |||||||||
| Expr2022180 | |||||||||
| Drives_construct | WBCnstr00026354 | ||||||||
| Construct_product | WBCnstr00026354 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (62) | |||||||||
| Interaction | WBInteraction000340339 | ||||||||
| WBInteraction000468547 | |||||||||
| Map_info | Positive | Positive_clone | F49H12 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | X | -17.0571 | |||||||
| Method | Gene |
