WormBase Tree Display for Gene: WBGene00018727
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| WBGene00018727 | SMap | S_parent | Sequence | F53A9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | jbts-14 | Person_evidence | WBPerson2136 | |||||
| Sequence_name | F53A9.4 | ||||||||
| Molecular_name | F53A9.4 | ||||||||
| F53A9.4.1 | |||||||||
| CE30141 | |||||||||
| Other_name | CELE_F53A9.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | jbts-14 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 08 Nov 2011 16:15:59 | WBPerson2970 | Name_change | CGC_name | jbts-14 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | jbts | ||||||||
| Allele (46) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (25) | |||||||||
| Structured_description | Automated_description | Involved in non-motile cilium assembly. Located in ciliary basal body and ciliary transition zone. Expressed in ciliated neurons. Used to study Joubert syndrome. Human ortholog(s) of this gene implicated in Joubert syndrome 14. Is an ortholog of human TMEM237 (transmembrane protein 237). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Experimental_model | DOID:0050777 | Homo sapiens | Paper_evidence | WBPaper00040522 | ||||
| Accession_evidence | OMIM | 614424 | |||||||
| Curator_confirmed | WBPerson324 | ||||||||
| Date_last_updated | 12 Aug 2013 00:00:00 | ||||||||
| Potential_model | DOID:0110983 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:14432) | |||||
| DOID:0050777 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:14432) | ||||||
| Models_disease_in_annotation | WBDOannot00000226 | ||||||||
| Molecular_info | Corresponding_CDS | F53A9.4 | |||||||
| Corresponding_transcript | F53A9.4.1 | ||||||||
| Other_sequence | CJC07093_1 | ||||||||
| Associated_feature | WBsf648377 | ||||||||
| WBsf1006223 | |||||||||
| WBsf236078 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00048061 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00001711 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00015462 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032660 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00023485 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr3176 | ||||||||
| Expr1028852 | |||||||||
| Expr1038063 | |||||||||
| Expr1151873 | |||||||||
| Expr2012881 | |||||||||
| Expr2031115 | |||||||||
| Drives_construct | WBCnstr00011196 | ||||||||
| WBCnstr00026313 | |||||||||
| Construct_product | WBCnstr00011196 | ||||||||
| WBCnstr00026313 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (135) | |||||||||
| Interaction (13) | |||||||||
| Map_info | Map | X | Position | 0.26398 | |||||
| Positive | Positive_clone | F53A9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00040522 | ||||||||
| WBPaper00048909 | |||||||||
| WBPaper00054643 | |||||||||
| WBPaper00060708 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
