WormBase Tree Display for Gene: WBGene00018757
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| WBGene00018757 | SMap | S_parent | Sequence | F53E2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | gid-8 | Person_evidence | WBPerson48679 | |||||
| Sequence_name | F53E2.1 | ||||||||
| Molecular_name | F53E2.1a | ||||||||
| F53E2.1a.1 | |||||||||
| CE30280 | |||||||||
| F53E2.1b | |||||||||
| CE20847 | |||||||||
| F53E2.1b.1 | |||||||||
| Other_name | tag-304 | ||||||||
| CELE_F53E2.1 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | gid-8 | ||||||||
| DB_info | Database | AceView | gene | 5B949 | |||||
| WormQTL | gene | WBGene00018757 | |||||||
| WormFlux | gene | WBGene00018757 | |||||||
| NDB | locus_tag | CELE_F53E2.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018757|UniProtKB=Q9UAU3 | |||||||
| family | PTHR12864 | ||||||||
| NCBI | gene | 178639 | |||||||
| RefSeq | protein | NM_071023.6 | |||||||
| NM_001313187.3 | |||||||||
| TrEMBL | UniProtAcc | Q9UAU3 | |||||||
| A0A0K3AUY3 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9UAU3 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Apr 2005 11:55:18 | WBPerson2970 | Name_change | CGC_name | tag-304 | ||||
| 3 | 08 Jul 2021 09:51:20 | WBPerson1983 | Name_change | CGC_name | gid-8 | ||||
| Other_name | tag-304 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | gid | ||||||||
| Allele (64) | |||||||||
| Strain | WBStrain00001234 | ||||||||
| WBStrain00001235 | |||||||||
| WBStrain00036260 | |||||||||
| WBStrain00036121 | |||||||||
| In_cluster | conserved_RDE-1_cluster | ||||||||
| conserved_miRNA_siRNA_cluster | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00001328 | ||||||||
| 00001329 | |||||||||
| 00001330 | |||||||||
| 00100678 | |||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00013202 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Located in nucleus. Is an ortholog of human GID8 (GID complex subunit 8 homolog). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F53E2.1a | |||||||
| F53E2.1b | |||||||||
| Corresponding_transcript | F53E2.1a.1 | ||||||||
| F53E2.1b.1 | |||||||||
| Other_sequence | CJC04223_1 | ||||||||
| Associated_feature | WBsf655079 | ||||||||
| WBsf999332 | |||||||||
| WBsf999333 | |||||||||
| WBsf999334 | |||||||||
| WBsf1019181 | |||||||||
| WBsf1019182 | |||||||||
| WBsf231414 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00048126 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00015510 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram763 | ||||||||
| Expr6153 | |||||||||
| Expr6154 | |||||||||
| Expr9484 | |||||||||
| Expr1013180 | |||||||||
| Expr1038081 | |||||||||
| Expr1151935 | |||||||||
| Expr2017267 | |||||||||
| Expr2035402 | |||||||||
| Drives_construct | WBCnstr00002126 | ||||||||
| WBCnstr00002127 | |||||||||
| WBCnstr00026291 | |||||||||
| Construct_product | WBCnstr00014049 | ||||||||
| WBCnstr00026291 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (96) | |||||||||
| Interaction (15) | |||||||||
| Map_info | Map | V | Position | -18.8846 | Error | 0.0034 | |||
| Positive | Positive_clone | F53E2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5180 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038444 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
