WormBase Tree Display for Gene: WBGene00018757
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WBGene00018757 | SMap | S_parent | Sequence | F53E2 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||
Name | CGC_name | gid-8 | Person_evidence | WBPerson48679 | |||
Sequence_name | F53E2.1 | ||||||
Molecular_name | F53E2.1a | ||||||
F53E2.1a.1 | |||||||
CE30280 | |||||||
F53E2.1b | |||||||
CE20847 | |||||||
F53E2.1b.1 | |||||||
Other_name | tag-304 | ||||||
CELE_F53E2.1 | Accession_evidence | NDB | BX284605 | ||||
Public_name | gid-8 | ||||||
DB_info | Database | AceView | gene | 5B949 | |||
WormQTL | gene | WBGene00018757 | |||||
WormFlux | gene | WBGene00018757 | |||||
NDB | locus_tag | CELE_F53E2.1 | |||||
Panther | gene | CAEEL|WormBase=WBGene00018757|UniProtKB=Q9UAU3 | |||||
family | PTHR12864 | ||||||
NCBI | gene | 178639 | |||||
RefSeq | protein | NM_071023.6 | |||||
NM_001313187.3 | |||||||
TrEMBL | UniProtAcc | Q9UAU3 | |||||
A0A0K3AUY3 | |||||||
UniProt_GCRP | UniProtAcc | Q9UAU3 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (3) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | gid | ||||||
Allele (64) | |||||||
Strain | WBStrain00001234 | ||||||
WBStrain00001235 | |||||||
WBStrain00036260 | |||||||
WBStrain00036121 | |||||||
In_cluster | conserved_RDE-1_cluster | ||||||
conserved_miRNA_siRNA_cluster | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00001328 | ||||||
00001329 | |||||||
00001330 | |||||||
00100678 | |||||||
Ortholog (35) | |||||||
Paralog | WBGene00013202 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
Structured_description | Automated_description | Predicted to be involved in proteasome-mediated ubiquitin-dependent protein catabolic process. Located in nucleus. Is an ortholog of human GID8 (GID complex subunit 8 homolog). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F53E2.1a | |||||
F53E2.1b | |||||||
Corresponding_transcript | F53E2.1a.1 | ||||||
F53E2.1b.1 | |||||||
Other_sequence | CJC04223_1 | ||||||
Associated_feature | WBsf655079 | ||||||
WBsf999332 | |||||||
WBsf999333 | |||||||
WBsf999334 | |||||||
WBsf1019181 | |||||||
WBsf1019182 | |||||||
WBsf231414 | |||||||
Experimental_info | RNAi_result | WBRNAi00048126 | Inferred_automatically | RNAi_primary | |||
WBRNAi00015510 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Chronogram763 | ||||||
Expr6153 | |||||||
Expr6154 | |||||||
Expr9484 | |||||||
Expr1013180 | |||||||
Expr1038081 | |||||||
Expr1151935 | |||||||
Expr2017267 | |||||||
Expr2035402 | |||||||
Drives_construct | WBCnstr00002126 | ||||||
WBCnstr00002127 | |||||||
WBCnstr00026291 | |||||||
Construct_product | WBCnstr00014049 | ||||||
WBCnstr00026291 | |||||||
Microarray_results (20) | |||||||
Expression_cluster (96) | |||||||
Interaction (15) | |||||||
Map_info | Map | V | Position | -18.8846 | Error | 0.0034 | |
Positive | Positive_clone | F53E2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 5180 | |||||
Pseudo_map_position | |||||||
Reference | WBPaper00038444 | ||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |