WormBase Tree Display for Gene: WBGene00018776
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| WBGene00018776 | SMap | S_parent | Sequence | F53H1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | ddx-46 | |||||||
| Sequence_name | F53H1.1 | ||||||||
| Molecular_name (15) | |||||||||
| Other_name | CELE_F53H1.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | ddx-46 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 11 Mar 2021 09:37:10 | WBPerson1983 | Name_change | CGC_name | ddx-46 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | ddx | ||||||||
| Allele (385) | |||||||||
| Strain | WBStrain00001848 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (73) | |||||||||
| Paralog (38) | |||||||||
| Structured_description | Automated_description | Predicted to enable several functions, including ATP binding activity; RNA binding activity; and RNA helicase activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be located in nucleus. Is an ortholog of human DDX46 (DEAD-box helicase 46). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F53H1.1a | |||||||
| F53H1.1b | |||||||||
| F53H1.1c | |||||||||
| F53H1.1d | |||||||||
| F53H1.1e | |||||||||
| Corresponding_CDS_history | F53H1.1a:wp145 | ||||||||
| F53H1.1b:wp145 | |||||||||
| Corresponding_transcript | F53H1.1a.1 | ||||||||
| F53H1.1b.1 | |||||||||
| F53H1.1c.1 | |||||||||
| F53H1.1d.1 | |||||||||
| F53H1.1e.1 | |||||||||
| Other_sequence (64) | |||||||||
| Associated_feature | WBsf995395 | ||||||||
| WBsf1016691 | |||||||||
| WBsf1016692 | |||||||||
| WBsf1016693 | |||||||||
| WBsf229757 | |||||||||
| WBsf229758 | |||||||||
| Experimental_info | RNAi_result (16) | ||||||||
| Expr_pattern | Chronogram1751 | ||||||||
| Expr1017372 | |||||||||
| Expr1038091 | |||||||||
| Expr1151997 | |||||||||
| Expr2004094 | |||||||||
| Expr2022318 | |||||||||
| Drives_construct | WBCnstr00002640 | ||||||||
| Microarray_results (38) | |||||||||
| Expression_cluster (111) | |||||||||
| Interaction (63) | |||||||||
| Map_info | Map | IV | Position | -20.3857 | |||||
| Positive | Positive_clone | F53H1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027281 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00042178 | |||||||||
| WBPaper00046427 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065026 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
