WormBase Tree Display for Gene: WBGene00018846
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| WBGene00018846 | SMap | S_parent | Sequence | F54H12 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | eef-1B.1 | Person_evidence | WBPerson1787 | |||||
| WBPerson10190 | |||||||||
| Sequence_name | F54H12.6 | ||||||||
| Molecular_name | F54H12.6 | ||||||||
| F54H12.6.1 | |||||||||
| CE00548 | |||||||||
| Other_name | CELE_F54H12.6 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | eef-1B.1 | ||||||||
| DB_info | Database | AceView | gene | 3J62 | |||||
| WormQTL | gene | WBGene00018846 | |||||||
| WormFlux | gene | WBGene00018846 | |||||||
| NDB | locus_tag | CELE_F54H12.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018846|UniProtKB=P34460 | |||||||
| family | PTHR11595 | ||||||||
| NCBI | gene | 176120 | |||||||
| RefSeq | protein | NM_066336.8 | |||||||
| SwissProt | UniProtAcc | P34460 | |||||||
| TREEFAM | TREEFAM_ID | TF313134 | |||||||
| UniProt_GCRP | UniProtAcc | P34460 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 03 Aug 2010 10:05:58 | WBPerson2970 | Name_change | CGC_name | eef-1B.1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | eef | ||||||||
| Allele (22) | |||||||||
| Strain | WBStrain00036745 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00042472 | ||||||||
| 00042473 | |||||||||
| 00042474 | |||||||||
| 00042475 | |||||||||
| 00042476 | |||||||||
| 00042477 | |||||||||
| 00042478 | |||||||||
| 00123845 | |||||||||
| 00123846 | |||||||||
| 00123847 | |||||||||
| Ortholog (43) | |||||||||
| Paralog | WBGene00012768 | Caenorhabditis elegans | From_analysis | Panther | |||||
| Structured_description | Automated_description | Predicted to enable guanyl-nucleotide exchange factor activity. Predicted to be involved in translational elongation. Predicted to be located in cytosol. Is an ortholog of human EEF1B2 (eukaryotic translation elongation factor 1 beta 2). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F54H12.6 | |||||||
| Corresponding_transcript | F54H12.6.1 | ||||||||
| Other_sequence (203) | |||||||||
| Associated_feature | WBsf651235 | ||||||||
| WBsf667118 | |||||||||
| WBsf667119 | |||||||||
| WBsf227060 | |||||||||
| WBsf227061 | |||||||||
| Experimental_info | RNAi_result (39) | ||||||||
| Expr_pattern | Expr1029011 | ||||||||
| Expr1038130 | |||||||||
| Expr1152188 | |||||||||
| Expr2011179 | |||||||||
| Expr2029415 | |||||||||
| Drives_construct | WBCnstr00026245 | ||||||||
| Construct_product | WBCnstr00026245 | ||||||||
| Microarray_results (17) | |||||||||
| Expression_cluster (153) | |||||||||
| Interaction (201) | |||||||||
| Map_info | Map | III | Position | -0.46015 | Error | 0.001762 | |||
| Positive | Positive_clone | F54H12 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027281 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041022 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056909 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
