WormBase Tree Display for Gene: WBGene00018898
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| WBGene00018898 | SMap | S_parent | Sequence | F55F10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F55F10.1 | |||||||
| Molecular_name | F55F10.1a | ||||||||
| F55F10.1a.1 | |||||||||
| CE48742 | |||||||||
| F55F10.1b | |||||||||
| CE48198 | |||||||||
| F55F10.1b.1 | |||||||||
| Other_name | Y24D9A.e | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_F55F10.1 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | F55F10.1 | ||||||||
| DB_info | Database | AceView | gene | 4F151 | |||||
| WormQTL | gene | WBGene00018898 | |||||||
| WormFlux | gene | WBGene00018898 | |||||||
| NDB | locus_tag | CELE_F55F10.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00018898|UniProtKB=L8E6W9 | |||||||
| family | PTHR48103 | ||||||||
| NCBI | gene | 186322 | |||||||
| RefSeq | protein | NM_001380187.2 | |||||||
| NM_001380186.1 | |||||||||
| TrEMBL | UniProtAcc | O61851 | |||||||
| L8E6W9 | |||||||||
| UniProt_GCRP | UniProtAcc | L8E6W9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (349) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00024212 | ||||||||
| 00024213 | |||||||||
| 00024214 | |||||||||
| 00024215 | |||||||||
| 00024216 | |||||||||
| 00123883 | |||||||||
| 00123884 | |||||||||
| 00123885 | |||||||||
| 00123886 | |||||||||
| Contained_in_operon | CEOP4120 | ||||||||
| Ortholog (48) | |||||||||
| Paralog | WBGene00023191 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | |||||
| WBGene00003210 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00008729 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00019601 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable ATP binding activity and ATP hydrolysis activity. Predicted to be involved in ribosomal large subunit export from nucleus. Predicted to be located in nucleus. Predicted to be part of preribosome, large subunit precursor. Is an ortholog of human MDN1 (midasin AAA ATPase 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F55F10.1a | |||||||
| F55F10.1b | |||||||||
| Corresponding_CDS_history | F55F10.1a:wp239 | ||||||||
| Corresponding_transcript | F55F10.1a.1 | ||||||||
| F55F10.1b.1 | |||||||||
| Other_sequence (78) | |||||||||
| Associated_feature | WBsf645920 | ||||||||
| WBsf660099 | |||||||||
| WBsf660100 | |||||||||
| WBsf660101 | |||||||||
| WBsf660102 | |||||||||
| WBsf660103 | |||||||||
| WBsf228191 | |||||||||
| Experimental_info | RNAi_result (31) | ||||||||
| Expr_pattern | Expr1019394 | ||||||||
| Expr1038155 | |||||||||
| Expr1152304 | |||||||||
| Expr2004229 | |||||||||
| Expr2022452 | |||||||||
| Microarray_results (29) | |||||||||
| Expression_cluster (120) | |||||||||
| Interaction (120) | |||||||||
| Map_info | Positive | Positive_clone | F55F10 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 0.191133 | |||||||
| Reference | WBPaper00027740 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
