WormBase Tree Display for Gene: WBGene00018908
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| WBGene00018908 | SMap | S_parent | Sequence | F56A3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fncm-1 | Person_evidence | WBPerson338 | |||||
| Sequence_name | F56A3.1 | ||||||||
| Molecular_name | F56A3.1 | ||||||||
| F56A3.1.1 | |||||||||
| CE28460 | |||||||||
| Other_name | CELE_F56A3.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | fncm-1 | ||||||||
| DB_info | Database | AceView | gene | 1F759 | |||||
| WormQTL | gene | WBGene00018908 | |||||||
| WormFlux | gene | WBGene00018908 | |||||||
| NDB | locus_tag | CELE_F56A3.1 | |||||||
| NCBI | gene | 172159 | |||||||
| RefSeq | protein | NM_059142.4 | |||||||
| TrEMBL | UniProtAcc | P91352 | |||||||
| UniProt_GCRP | UniProtAcc | P91352 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:00 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Aug 2008 17:05:47 | WBPerson2970 | Name_change | CGC_name | fncm-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fncm | ||||||||
| Allele (63) | |||||||||
| Strain | WBStrain00051058 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (21) | |||||||||
| Structured_description | Automated_description | Enriched in Z1.p; Z4.a; germ line; germline precursor cell; and male distal tip cell based on RNA-seq studies. Is affected by several genes including skn-1; dpy-10; and hsf-1 based on microarray; RNA-seq; and proteomic studies. Is affected by sixteen chemicals including rotenone; D-glucose; and Zidovudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F56A3.1 | |||||||
| Corresponding_transcript | F56A3.1.1 | ||||||||
| Other_sequence | JI469485.1 | ||||||||
| JI480859.1 | |||||||||
| CJC02153_1 | |||||||||
| JI475169.1 | |||||||||
| HC08383 | |||||||||
| Associated_feature | WBsf217635 | ||||||||
| WBsf217636 | |||||||||
| WBsf217637 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00048583 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00077877 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001917 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007716 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003804 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00032914 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1010578 | ||||||||
| Expr1038161 | |||||||||
| Expr1152367 | |||||||||
| Expr2011862 | |||||||||
| Expr2030100 | |||||||||
| Drives_construct | WBCnstr00026195 | ||||||||
| Construct_product | WBCnstr00026195 | ||||||||
| WBCnstr00039712 | |||||||||
| Antibody | WBAntibody00002098 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (118) | |||||||||
| Interaction | WBInteraction000289147 | ||||||||
| WBInteraction000292332 | |||||||||
| WBInteraction000303756 | |||||||||
| WBInteraction000342401 | |||||||||
| WBInteraction000385224 | |||||||||
| WBInteraction000427778 | |||||||||
| WBInteraction000444705 | |||||||||
| WBInteraction000457318 | |||||||||
| WBInteraction000556067 | |||||||||
| WBInteraction000556068 | |||||||||
| Map_info | Map | I | Position | -0.292583 | Error | 0.00363 | |||
| Positive | Positive_clone | F56A3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00035602 | ||||||||
| WBPaper00053896 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
