WormBase Tree Display for Gene: WBGene00018919
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| WBGene00018919 | SMap | S_parent | Sequence | F56A4 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | F56A4.11 | ||||||||
| Molecular_name | F56A4.11 | |||||||||
| Other_name | CELE_F56A4.11 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | F56A4.11 | |||||||||
| DB_info | Database | AceView | gene | 5C948 | ||||||
| WormQTL | gene | WBGene00018919 | ||||||||
| WormFlux | gene | WBGene00018919 | ||||||||
| NDB | locus_tag | CELE_F56A4.11 | ||||||||
| NCBI | gene | 186354 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 09 Sep 2015 15:28:46 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (11) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00024393 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| WBGene00150611 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| WBGene00141305 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| WBGene00192731 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| WBGene00156116 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| WBGene00130289 | Caenorhabditis japonica | From_analysis | TreeFam | |||||||
| WBGene00061139 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| Paralog (35) | ||||||||||
| Structured_description | Automated_description | Is affected by several genes including eat-2; sir-2.1; and pgl-1 based on microarray and RNA-seq studies. Is affected by Lithium Chloride based on microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | F56A4.11:wp250 | ||||||||
| Corresponding_pseudogene | F56A4.11 | |||||||||
| Other_sequence | ACC21263_1 | |||||||||
| EX565541.1 | ||||||||||
| Experimental_info | Expr_pattern | Expr1016969 | ||||||||
| Expr1152374 | ||||||||||
| Microarray_results | SMD_F56A4.B | |||||||||
| Aff_Y19D10A.G | ||||||||||
| Expression_cluster (15) | ||||||||||
| Interaction | WBInteraction000144606 | |||||||||
| WBInteraction000258560 | ||||||||||
| WBInteraction000331463 | ||||||||||
| WBInteraction000341244 | ||||||||||
| WBInteraction000341315 | ||||||||||
| WBInteraction000446043 | ||||||||||
| WBInteraction000466965 | ||||||||||
| WBInteraction000468524 | ||||||||||
| WBInteraction000468549 | ||||||||||
| WBInteraction000471157 | ||||||||||
| Map_info | Positive | Positive_clone | F56A4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | V | -14.8432 | ||||||||
| Method | Gene |
