WormBase Tree Display for Gene: WBGene00018964
expand all nodes | collapse all nodes | view schema
WBGene00018964 | SMap | S_parent | Sequence | F56D2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F56D2.2 | |||||||
Molecular_name | F56D2.2 | ||||||||
F56D2.2.1 | |||||||||
CE54186 | |||||||||
Other_name | CELE_F56D2.2 | Accession_evidence | NDB | BX284603 | |||||
Public_name | F56D2.2 | ||||||||
DB_info | Database (12) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (22) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (12) | |||||||||
Ortholog (34) | |||||||||
Paralog (11) | |||||||||
Structured_description | Automated_description | Predicted to enable ubiquitin conjugating enzyme binding activity and ubiquitin protein ligase activity. Predicted to be involved in positive regulation of proteasomal ubiquitin-dependent protein catabolic process; protein polyubiquitination; and ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm. Predicted to be part of ubiquitin ligase complex. Is an ortholog of human RNF14 (ring finger protein 14). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F56D2.2 | |||||||
Corresponding_CDS_history | F56D2.2:wp275 | ||||||||
Corresponding_transcript | F56D2.2.1 | ||||||||
Other_sequence (18) | |||||||||
Associated_feature | WBsf645183 | ||||||||
Experimental_info | RNAi_result (11) | ||||||||
Expr_pattern | Expr1018822 | ||||||||
Expr1038184 | |||||||||
Expr1152451 | |||||||||
Expr2004291 | |||||||||
Expr2022515 | |||||||||
Drives_construct | WBCnstr00026160 | ||||||||
Construct_product | WBCnstr00026160 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (118) | |||||||||
SAGE_tag | SAGE:cagtgtctagcagaagg | Strand | Sense | ||||||
Unambiguously_mapped | |||||||||
SAGE:ctctggacgtctgttcg | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:gcttttgaca | Strand | Antisense | |||||||
SAGE:ctctggacgt | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
SAGE:atccatctcc | Strand | Antisense | |||||||
SAGE:cagtgtctag | Strand | Sense | |||||||
Unambiguously_mapped | |||||||||
Interaction (44) | |||||||||
Map_info | Positive | Positive_clone | F56D2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | III | -1.52697 | |||||||
Reference | WBPaper00027075 | ||||||||
WBPaper00027315 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
Method | Gene |