WormBase Tree Display for Gene: WBGene00019038
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| WBGene00019038 | SMap | S_parent | Sequence | F58E1 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | irld-37 | Person_evidence | WBPerson260 | ||||||
| Sequence_name | F58E1.7 | |||||||||
| Molecular_name | F58E1.7 | |||||||||
| Other_name | CELE_F58E1.7 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | irld-37 | |||||||||
| DB_info | Database | AceView | gene | 2B966 | ||||||
| WormQTL | gene | WBGene00019038 | ||||||||
| WormFlux | gene | WBGene00019038 | ||||||||
| NDB | locus_tag | CELE_F58E1.7 | ||||||||
| NCBI | gene | 186512 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 25 May 2012 15:57:08 | WBPerson2970 | Name_change | CGC_name | irld-37 | |||||
| 3 | 21 Nov 2019 15:06:47 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | irld | |||||||||
| Allele (58) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00146806 | Caenorhabditis brenneri | From_analysis | TreeFam | ||||||
| Paralog (74) | ||||||||||
| Structured_description | Automated_description | Enriched in ASJL; ASJR; NSM; and neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-2; eat-2; and clk-1 based on tiling array; microarray; and RNA-seq studies. Is affected by seven chemicals including Zidovudine; Psoralens; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | F58E1.7:wp160 | ||||||||
| F58E1.7:wp274 | ||||||||||
| Corresponding_pseudogene | F58E1.7 | |||||||||
| Experimental_info | Expr_pattern | Expr1022472 | ||||||||
| Expr1152730 | ||||||||||
| Expr2012844 | ||||||||||
| Expr2031081 | ||||||||||
| Drives_construct | WBCnstr00026108 | |||||||||
| Construct_product | WBCnstr00026108 | |||||||||
| Microarray_results (15) | ||||||||||
| Expression_cluster (34) | ||||||||||
| Interaction | WBInteraction000162004 | |||||||||
| WBInteraction000260940 | ||||||||||
| WBInteraction000393135 | ||||||||||
| WBInteraction000417802 | ||||||||||
| WBInteraction000454120 | ||||||||||
| Map_info | Map | II | Position | -14.6184 | ||||||
| Positive | Positive_clone | F58E1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
