WormBase Tree Display for Gene: WBGene00019050
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| WBGene00019050 | SMap | S_parent | Sequence | F58E2 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | srz-88 | Person_evidence | WBPerson522 | ||||||
| Sequence_name | F58E2.7 | |||||||||
| Molecular_name | F58E2.7 | |||||||||
| Other_name | CELE_F58E2.7 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | srz-88 | |||||||||
| DB_info | Database | AceView | gene | 4E220 | ||||||
| WormQTL | gene | WBGene00019050 | ||||||||
| NDB | locus_tag | CELE_F58E2.7 | ||||||||
| NCBI | gene | 13192627 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 28 Jul 2004 15:59:55 | WBPerson1867 | Event | Changed_class | CDS | Pseudogene | ||||
| 3 | 31 Aug 2004 10:04:31 | WBPerson1971 | Name_change | CGC_name | srz-88 | |||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | srz | |||||||||
| Allele (27) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Paralog | WBGene00018972 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| Structured_description | Automated_description | Is affected by qui-1 and let-60 based on RNA-seq and microarray studies. Is affected by resveratrol based on microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | F58E2.7:wp128 | ||||||||
| Corresponding_pseudogene | F58E2.7 | |||||||||
| Experimental_info | Microarray_results | SMD_F58E2.7 | ||||||||
| 183271_at | ||||||||||
| A_12_P154005 | ||||||||||
| Aff_F58E2.7 | ||||||||||
| GPL19516_CGZ0025246 | ||||||||||
| GPL21109_F58E2.7 | ||||||||||
| GPL3518_CE17135 | ||||||||||
| Expression_cluster | WBPaper00032031:DConiospora_upregulated_OligoArray_24h | |||||||||
| WBPaper00061527:srj-42-srw-113 | ||||||||||
| WBPaper00062520:qui-1(db104)_downregulated | ||||||||||
| WBPaper00026929:Resveratrol_regulated_daf-16 | ||||||||||
| [cgc5376]:let-60(G12V)-regulated_genes | ||||||||||
| Map_info | Map | IV | Position | -3.9217 | Error | 0.020746 | ||||
| Positive | Positive_clone | F58E2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
