WormBase Tree Display for Gene: WBGene00019117
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| WBGene00019117 | SMap | S_parent | Sequence | F59E11 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | nhr-144 | Person_evidence | WBPerson600 | ||||||
| Sequence_name | F59E11.12 | |||||||||
| Molecular_name | F59E11.12 | |||||||||
| Other_name | CELE_F59E11.12 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | nhr-144 | |||||||||
| DB_info | Database | AceView | gene | 5J452 | ||||||
| WormQTL | gene | WBGene00019117 | ||||||||
| WormFlux | gene | WBGene00019117 | ||||||||
| NDB | locus_tag | CELE_F59E11.12 | ||||||||
| NCBI | gene | 186627 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | |||
| 2 | 22 Jul 2005 10:29:11 | WBPerson2970 | Name_change | CGC_name | nhr-144 | |||||
| 3 | 28 May 2014 12:00:01 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | nhr | |||||||||
| Allele (94) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Contained_in_operon | CEOP5570 | |||||||||
| CEOP5216 | ||||||||||
| Structured_description | Automated_description | Enriched in Z1.p; Z4.a; intestine; male distal tip cell; and somatic gonad precursor based on RNA-seq studies. Is affected by several genes including daf-16; dpy-10; and daf-12 based on microarray and RNA-seq studies. Is affected by eleven chemicals including rotenone; levamisole; and Zidovudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | F59E11.12:wp92 | ||||||||
| F59E11.12a:wp243 | ||||||||||
| F59E11.12b:wp243 | ||||||||||
| Corresponding_pseudogene | F59E11.12 | |||||||||
| Other_sequence | MH06969 | |||||||||
| MHC03152_1 | ||||||||||
| MH01714 | ||||||||||
| Associated_feature | WBsf652880 | |||||||||
| WBsf652881 | ||||||||||
| WBsf669195 | ||||||||||
| Experimental_info | Expr_pattern | Expr1025994 | ||||||||
| Expr1152935 | ||||||||||
| Microarray_results (14) | ||||||||||
| Expression_cluster (88) | ||||||||||
| Interaction | WBInteraction000268291 | |||||||||
| WBInteraction000357986 | ||||||||||
| WBInteraction000359846 | ||||||||||
| Map_info | Map | V | Position | 1.89635 | Error | 0.000664 | ||||
| Positive | Positive_clone | F59E11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Mapping_data | Multi_point | 5392 | ||||||||
| 5429 | ||||||||||
| 5029 | ||||||||||
| Pseudo_map_position | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
