WormBase Tree Display for Gene: WBGene00019168
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| WBGene00019168 | SMap | S_parent | Sequence | H06I04 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | H06I04.3 | |||||||
| Molecular_name | H06I04.3a | ||||||||
| H06I04.3a.1 | |||||||||
| CE23795 | |||||||||
| H06I04.3b | |||||||||
| CE38200 | |||||||||
| H06I04.3c | |||||||||
| CE38201 | |||||||||
| H06I04.3b.1 | |||||||||
| H06I04.3c.1 | |||||||||
| Other_name | H06I04.g | Curator_confirmed | WBPerson1983 | ||||||
| Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
| CELE_H06I04.3 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | H06I04.3 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (383) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (21) | |||||||||
| Contained_in_operon | CEOP3088 | ||||||||
| Ortholog (41) | |||||||||
| Paralog | WBGene00009735 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00011281 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable rRNA (guanine) methyltransferase activity and rRNA (uridine-2'-O-)-methyltransferase activity. Predicted to be involved in maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA); and rRNA methylation. Predicted to be located in nucleolus. Predicted to be part of preribosome, large subunit precursor. Is an ortholog of human FTSJ3 (FtsJ RNA 2'-O-methyltransferase 3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | H06I04.3a | |||||||
| H06I04.3b | |||||||||
| H06I04.3c | |||||||||
| Corresponding_CDS_history | H06I04.3b:wp140 | ||||||||
| Corresponding_transcript | H06I04.3a.1 | ||||||||
| H06I04.3b.1 | |||||||||
| H06I04.3c.1 | |||||||||
| Other_sequence (77) | |||||||||
| Associated_feature | WBsf658732 | ||||||||
| WBsf991664 | |||||||||
| WBsf991665 | |||||||||
| WBsf1014507 | |||||||||
| WBsf224574 | |||||||||
| Experimental_info | RNAi_result (35) | ||||||||
| Expr_pattern | Expr1010402 | ||||||||
| Expr1038278 | |||||||||
| Expr1153064 | |||||||||
| Expr2004531 | |||||||||
| Expr2022757 | |||||||||
| Microarray_results (40) | |||||||||
| Expression_cluster (129) | |||||||||
| Interaction (246) | |||||||||
| Map_info | Positive | Positive_clone | H06I04 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -7.86585 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
