WormBase Tree Display for Gene: WBGene00019246
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WBGene00019246 | SMap | S_parent | Sequence | H27M09 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | rpb-5 | Person_evidence | WBPerson1787 | |||||
Sequence_name | H27M09.2 | ||||||||
Molecular_name | H27M09.2 | ||||||||
H27M09.2.1 | |||||||||
CE23831 | |||||||||
Other_name | let-397 | Person_evidence | WBPerson533 | ||||||
CELE_H27M09.2 | Accession_evidence | NDB | BX284601 | ||||||
Public_name | rpb-5 | ||||||||
DB_info | Database | AceView | gene | 1H427 | |||||
WormQTL | gene | WBGene00019246 | |||||||
WormFlux | gene | WBGene00019246 | |||||||
NDB | locus_tag | CELE_H27M09.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00019246|UniProtKB=Q9N5K2 | |||||||
family | PTHR10535 | ||||||||
NCBI | gene | 172412 | |||||||
RefSeq | protein | NM_059560.5 | |||||||
SwissProt | UniProtAcc | Q9N5K2 | |||||||
TREEFAM | TREEFAM_ID | TF103040 | |||||||
UniProt_GCRP | UniProtAcc | Q9N5K2 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 04 Oct 2007 14:17:58 | WBPerson2970 | Name_change | CGC_name | rpb-5 | ||||
3 | 04 Mar 2015 14:41:53 | WBPerson2970 | Event | Acquires_merge | WBGene00002617 | ||||
Name_change | Other_name | let-397 | |||||||
Acquires_merge | WBGene00002617 | ||||||||
Status | Live | ||||||||
Gene_info (11) | |||||||||
Molecular_info | Corresponding_CDS | H27M09.2 | |||||||
Corresponding_transcript | H27M09.2.1 | ||||||||
Other_sequence (89) | |||||||||
Associated_feature | WBsf654799 | ||||||||
WBsf217911 | |||||||||
WBsf217912 | |||||||||
WBsf217913 | |||||||||
Experimental_info | RNAi_result | WBRNAi00116465 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00083861 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00049508 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00033760 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00083885 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00000731 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00083873 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00098605 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00098662 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00098642 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1015961 | ||||||||
Expr1038313 | |||||||||
Expr1153229 | |||||||||
Expr2015425 | |||||||||
Expr2033660 | |||||||||
Drives_construct | WBCnstr00025970 | ||||||||
Construct_product | WBCnstr00025970 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (125) | |||||||||
Interaction (235) | |||||||||
Map_info | Map | I | Position | 1.39627 | |||||
Hide_under | WBGene00002612 | ||||||||
Positive | Positive_clone | H27M09 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Negative | Negative_clone | C37A2 | |||||||
E02D9 | |||||||||
K01B11 | |||||||||
T14D10 | |||||||||
T21G5 | |||||||||
Mapping_data | Multi_point | 1462 | |||||||
Pos_neg_data | 5357 | ||||||||
6546 | |||||||||
5079 | |||||||||
6171 | |||||||||
4183 | |||||||||
Pseudo_map_position | |||||||||
Reference (13) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
[McKay S] transformation rescue; extrachromosomal array generated, then used as free duplication in genetic manipulation | |||||||||
Method | Gene |