WormBase Tree Display for Gene: WBGene00019247
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WBGene00019247 | SMap | S_parent | Sequence | H27M09 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | syp-4 | Paper_evidence | WBPaper00030765 | |||
Person_evidence | WBPerson1547 | ||||||
Sequence_name | H27M09.3 | ||||||
Molecular_name | H27M09.3 | ||||||
H27M09.3.1 | |||||||
CE23830 | |||||||
Other_name | CELE_H27M09.3 | Accession_evidence | NDB | BX284601 | |||
Public_name | syp-4 | ||||||
DB_info | Database | AceView | gene | 1H425 | |||
WormQTL | gene | WBGene00019247 | |||||
WormFlux | gene | WBGene00019247 | |||||
NDB | locus_tag | CELE_H27M09.3 | |||||
NCBI | gene | 172411 | |||||
RefSeq | protein | NM_059559.5 | |||||
SwissProt | UniProtAcc | Q9N5K3 | |||||
UniProt_GCRP | UniProtAcc | Q9N5K3 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | syp | ||||||
Allele (26) | |||||||
Strain | WBStrain00005203 | ||||||
WBStrain00051039 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00095460 | ||||||
00095461 | |||||||
00095462 | |||||||
00095463 | |||||||
00095464 | |||||||
00095465 | |||||||
Contained_in_operon | CEOP1902 | ||||||
Ortholog (19) | |||||||
Structured_description | Automated_description | Predicted to be involved in meiotic cell cycle. Located in central element. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | H27M09.3 | |||||
Corresponding_transcript | H27M09.3.1 | ||||||
Other_sequence | CBC05056_1 | ||||||
Associated_feature | WBsf643407 | ||||||
WBsf656454 | |||||||
WBsf217909 | |||||||
WBsf217910 | |||||||
Experimental_info | RNAi_result | WBRNAi00033761 | Inferred_automatically | RNAi_primary | |||
WBRNAi00108160 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00108161 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00108159 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00049509 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr8806 | ||||||
Expr1013460 | |||||||
Expr1038314 | |||||||
Expr1153230 | |||||||
Expr2017187 | |||||||
Expr2035323 | |||||||
Drives_construct | WBCnstr00025969 | ||||||
Construct_product | WBCnstr00025969 | ||||||
Antibody | WBAntibody00001990 | ||||||
WBAntibody00002753 | |||||||
WBAntibody00003038 | |||||||
Microarray_results (18) | |||||||
Expression_cluster (125) | |||||||
Interaction | WBInteraction000554873 | ||||||
WBInteraction000556905 | |||||||
WBInteraction000556906 | |||||||
WBInteraction000567055 | |||||||
WBInteraction000567076 | |||||||
WBInteraction000567094 | |||||||
Map_info | Map | I | Position | 1.38959 | Error | 0.00461 | |
Positive | Positive_clone | H27M09 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference (13) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |