WormBase Tree Display for Gene: WBGene00019264
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| WBGene00019264 | SMap | S_parent | Sequence | H35B03 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | H35B03.2 | |||||||
| Molecular_name | H35B03.2c | ||||||||
| H35B03.2b | |||||||||
| CE49396 | |||||||||
| H35B03.2d | |||||||||
| CE49145 | |||||||||
| H35B03.2c.1 | |||||||||
| H35B03.2d.1 | |||||||||
| Other_name | CELE_H35B03.2 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | H35B03.2 | ||||||||
| DB_info | Database | AceView | gene | 4G494 | |||||
| WormQTL | gene | WBGene00019264 | |||||||
| WormFlux | gene | WBGene00019264 | |||||||
| NDB | locus_tag | CELE_H35B03.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019264|UniProtKB=V6CJB4 | |||||||
| family | PTHR13031 | ||||||||
| NCBI | gene | 177349 | |||||||
| RefSeq | protein | NR_131505.1 | |||||||
| NM_001306863.3 | |||||||||
| NM_001306862.4 | |||||||||
| TrEMBL | UniProtAcc | V6CJB4 | |||||||
| V6CKG6 | |||||||||
| UniProt_GCRP | UniProtAcc | V6CJB4 | |||||||
| RNAcentral | URSid | URS00001A602D | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (31) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00105314 | ||||||||
| 00105315 | |||||||||
| 00105316 | |||||||||
| 00105317 | |||||||||
| 00124157 | |||||||||
| Ortholog (31) | |||||||||
| Structured_description | Concise_description | H35B03.2 encodes an ortholog of Rpp1 (Rpp30), a protein subunit sharedby the endoribonucleases RNase MRP and RNAse P; RNAse MRP cleavesmitochondrial RNA in mitochondrial DNA synthesis, nucleolar pre-rRNA inribosome synthesis, and at least one mRNA (CLB2) involved in cell-cycleregulation; RNAse P cleaves tRNA precursors to produce their mature 5'end; H35B03.2 is evolutionarily ubiquitous among eukaryotes. | Paper_evidence | WBPaper00028606 | |||||
| WBPaper00028843 | |||||||||
| WBPaper00028845 | |||||||||
| WBPaper00028925 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 06 Jan 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable RNA binding activity. Predicted to be involved in tRNA processing. Predicted to be part of nucleolar ribonuclease P complex. Is an ortholog of human RPP30 (ribonuclease P/MRP subunit p30). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | H35B03.2c | |||||||
| H35B03.2d | |||||||||
| Corresponding_CDS_history | H35B03.2a:wp261 | ||||||||
| Corresponding_transcript | H35B03.2b | ||||||||
| H35B03.2c.1 | |||||||||
| H35B03.2d.1 | |||||||||
| Other_sequence | CR12666 | ||||||||
| CBC07497_1 | |||||||||
| Oden_isotig23504 | |||||||||
| CRC06848_1 | |||||||||
| Acan_isotig10081 | |||||||||
| Associated_feature | WBsf655512 | ||||||||
| WBsf667955 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00008932 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00033776 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00062038 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00071412 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00025817 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00049536 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013340 | ||||||||
| Expr1038321 | |||||||||
| Expr1153259 | |||||||||
| Expr2004602 | |||||||||
| Expr2022827 | |||||||||
| Drives_construct | WBCnstr00025958 | ||||||||
| Construct_product | WBCnstr00025958 | ||||||||
| Microarray_results (30) | |||||||||
| Expression_cluster (94) | |||||||||
| Interaction | WBInteraction000119271 | ||||||||
| WBInteraction000123565 | |||||||||
| WBInteraction000339573 | |||||||||
| WBInteraction000339574 | |||||||||
| WBInteraction000362937 | |||||||||
| WBInteraction000447340 | |||||||||
| Map_info | Positive | Positive_clone | H35B03 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 2.23734 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
