WormBase Tree Display for Gene: WBGene00019331
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WBGene00019331 | SMap | S_parent | Sequence | K02F3 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | dos-3 | Person_evidence | WBPerson242 | |||||
Sequence_name | K02F3.8 | ||||||||
Molecular_name | K02F3.8 | ||||||||
K02F3.8.1 | |||||||||
CE44852 | |||||||||
Other_name | CELE_K02F3.8 | Accession_evidence | NDB | BX284603 | |||||
Public_name | dos-3 | ||||||||
DB_info | Database | AceView | gene | 3B454 | |||||
WormQTL | gene | WBGene00019331 | |||||||
WormFlux | gene | WBGene00019331 | |||||||
NDB | locus_tag | CELE_K02F3.8 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00019331|UniProtKB=B2MZA5 | |||||||
family | PTHR35015 | ||||||||
NCBI | gene | 186905 | |||||||
RefSeq | protein | NM_064870.8 | |||||||
TREEFAM | TREEFAM_ID | TF315672 | |||||||
TrEMBL | UniProtAcc | B2MZA5 | |||||||
UniProt_GCRP | UniProtAcc | B2MZA5 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 18 Apr 2008 10:26:24 | WBPerson1867 | Event | Acquires_merge | WBGene00019330 | ||||
Name_change | CGC_name | dos-3 | |||||||
Acquires_merge | WBGene00019330 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | dos | ||||||||
Allele (73) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00005889 | ||||||||
00005890 | |||||||||
00005891 | |||||||||
Ortholog (29) | |||||||||
Paralog | WBGene00003887 | Caenorhabditis elegans | From_analysis | Panther | |||||
WormBase-Compara | |||||||||
WBGene00003891 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WBGene00013980 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WBGene00019640 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable Notch binding activity. Predicted to be involved in positive regulation of Notch signaling pathway. Predicted to be located in extracellular space. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | K02F3.8 | |||||||
Corresponding_CDS_history | K02F3.8:wp190 | ||||||||
Corresponding_transcript | K02F3.8.1 | ||||||||
Other_sequence | Tcol_isotig12982 | ||||||||
Acan_isotig14671 | |||||||||
Tcir_isotig27975 | |||||||||
Hbac_isotig00769 | |||||||||
JK314852.1 | |||||||||
Dviv_isotig32660 | |||||||||
Dviv_isotig26642 | |||||||||
Associated_feature | WBsf226132 | ||||||||
Transcription_factor | WBTranscriptionFactor000307 | ||||||||
Experimental_info | RNAi_result | WBRNAi00088840 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00049754 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00049755 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00016488 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00006534 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00006522 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1020579 | ||||||||
Expr1153470 | |||||||||
Expr2011034 | |||||||||
Expr2029271 | |||||||||
Microarray_results (30) | |||||||||
Expression_cluster (100) | |||||||||
Interaction (42) | |||||||||
Map_info | Map | III | Position | -25.7674 | Error | 0.001534 | |||
Positive | Positive_clone | K02F3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00027309 | ||||||||
WBPaper00040714 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |