WormBase Tree Display for Gene: WBGene00019407
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WBGene00019407 | SMap | S_parent | Sequence | K05F1 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | lect | |||||
Allele (63) | ||||||
Strain | WBStrain00032667 | |||||
WBStrain00030278 | ||||||
WBStrain00030280 | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation (23) | ||||||
Ortholog (37) | ||||||
Paralog | WBGene00270309 | Caenorhabditis elegans | From_analysis | Panther | ||
Structured_description | Automated_description | Predicted to enable metal ion binding activity. Involved in innervation; regulation of dendrite extension; and regulation of dendrite morphogenesis. Located in basement membrane; cell surface; and somatodendritic compartment. Expressed in body wall musculature; coelomocyte; head neurons; and ventral cord neurons. Human ortholog(s) of this gene implicated in hepatocellular carcinoma and lung adenocarcinoma. Is an ortholog of human LECT2 (leukocyte cell derived chemotaxin 2). | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Disease_info | Potential_model | DOID:3910 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6550) | |
DOID:684 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:6550) | |||
Molecular_info | Corresponding_CDS | K05F1.5 | ||||
Corresponding_CDS_history | K05F1.5:wp255 | |||||
Corresponding_transcript | K05F1.5.1 | |||||
Other_sequence (49) | ||||||
Associated_feature | WBsf657624 | |||||
WBsf657625 | ||||||
WBsf657626 | ||||||
WBsf987962 | ||||||
WBsf221342 | ||||||
Transcription_factor | WBTranscriptionFactor000903 | |||||
Experimental_info | RNAi_result | WBRNAi00016629 | Inferred_automatically | RNAi_primary | ||
WBRNAi00076545 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00081156 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00016630 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00049991 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00049992 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr13005 | |||||
Expr13006 | ||||||
Expr13152 | ||||||
Expr13153 | ||||||
Expr1021828 | ||||||
Expr1038381 | ||||||
Expr1153686 | ||||||
Expr1200321 | ||||||
Expr2013043 | ||||||
Expr2031275 | ||||||
Drives_construct | WBCnstr00025860 | |||||
WBCnstr00038191 | ||||||
WBCnstr00038390 | ||||||
Construct_product | WBCnstr00021928 | |||||
WBCnstr00025860 | ||||||
WBCnstr00038191 | ||||||
Microarray_results (24) | ||||||
Expression_cluster (153) | ||||||
Interaction (11) | ||||||
Map_info | Map | II | Position | -0.930501 | ||
Positive | Positive_clone | K05F1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Reference (11) | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |