WormBase Tree Display for Gene: WBGene00019428
expand all nodes | collapse all nodes | view schema
| WBGene00019428 | SMap | S_parent | Sequence | CHROMOSOME_II | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | dgk-5 | Person_evidence | WBPerson453 | |||||
| Sequence_name | K06A1.6 | ||||||||
| Molecular_name (15) | |||||||||
| Other_name | CELE_K06A1.6 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | dgk-5 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 01 Aug 2007 11:06:01 | WBPerson2970 | Name_change | CGC_name | dgk-5 | ||||
| 3 | 18 Jul 2018 16:44:02 | WBPerson1983 | Event | Acquires_merge | WBGene00044669 | ||||
| Acquires_merge | WBGene00044669 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dgk | ||||||||
| Allele (130) | |||||||||
| Strain | WBStrain00032519 | ||||||||
| WBStrain00036558 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Ortholog (41) | |||||||||
| Paralog | WBGene00000958 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00000959 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00000960 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00006483 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | dgk-5 encodes a putative diacylglycerol kinase, orthologous toDrosophila RDGA, and to human DGKI (OMIM:604072) and DGKZ (OMIM:601441);DGK-5 has no obvious function in mass RNAi assays. | Paper_evidence | WBPaper00031504 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 16 Mar 2008 00:00:00 | ||||||||
| Automated_description | Predicted to enable ATP-dependent diacylglycerol kinase activity. Predicted to be involved in diacylglycerol metabolic process; intracellular signal transduction; and lipid phosphorylation. Is an ortholog of human DGKI (diacylglycerol kinase iota) and DGKZ (diacylglycerol kinase zeta). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K06A1.6a | |||||||
| K06A1.6b | |||||||||
| K06A1.6c | |||||||||
| K06A1.6d | |||||||||
| K06A1.6e | |||||||||
| Corresponding_transcript | K06A1.6a.1 | ||||||||
| K06A1.6b.1 | |||||||||
| K06A1.6c.1 | |||||||||
| K06A1.6d.1 | |||||||||
| K06A1.6e.1 | |||||||||
| Other_sequence (25) | |||||||||
| Associated_feature (12) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00019403 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00050019 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016652 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1015434 | ||||||||
| Expr1022940 | |||||||||
| Expr1038393 | |||||||||
| Expr1153712 | |||||||||
| Expr1157960 | |||||||||
| Expr2006619 | |||||||||
| Expr2010867 | |||||||||
| Expr2024836 | |||||||||
| Expr2029105 | |||||||||
| Drives_construct | WBCnstr00023411 | ||||||||
| WBCnstr00025845 | |||||||||
| Construct_product | WBCnstr00023411 | ||||||||
| WBCnstr00025845 | |||||||||
| Microarray_results (36) | |||||||||
| Expression_cluster (145) | |||||||||
| Interaction (13) | |||||||||
| Map_info | Map | II | Position | -0.225699 | Error | 0.002548 | |||
| Positive | Positive_clone | K06A1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00042257 | |||||||||
| WBPaper00045327 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064934 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
