WormBase Tree Display for Gene: WBGene00019493
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| WBGene00019493 | SMap | S_parent | Sequence | K07E3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | catp-5 | Person_evidence | WBPerson61 | |||||
| WBPerson2757 | |||||||||
| Sequence_name | K07E3.7 | ||||||||
| Molecular_name | K07E3.7a | ||||||||
| K07E3.7a.1 | |||||||||
| CE37253 | |||||||||
| K07E3.7c | |||||||||
| CE51255 | |||||||||
| K07E3.7a.2 | |||||||||
| K07E3.7a.3 | |||||||||
| K07E3.7a.4 | |||||||||
| K07E3.7c.1 | |||||||||
| Other_name | CELE_K07E3.7 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | catp-5 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:01 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 21 Oct 2008 09:57:23 | WBPerson2970 | Name_change | CGC_name | catp-5 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | catp | ||||||||
| Allele (165) | |||||||||
| Strain | WBStrain00037407 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (30) | |||||||||
| Ortholog (37) | |||||||||
| Paralog (14) | |||||||||
| Structured_description | Automated_description | Enables polyamine transmembrane transporter activity. Involved in polyamine transmembrane transport. Located in apical plasma membrane. Expressed in amphid neurons; excretory cell; germ cell; gonad; and intestine. Human ortholog(s) of this gene implicated in primary pulmonary hypertension. Is an ortholog of human ATP13A3 (ATPase 13A3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:14557 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:24113) | ||||
| Molecular_info | Corresponding_CDS | K07E3.7a | |||||||
| K07E3.7c | |||||||||
| Corresponding_CDS_history | K07E3.7:wp102 | ||||||||
| K07E3.7:wp129 | |||||||||
| K07E3.7b:wp272 | |||||||||
| Corresponding_transcript | K07E3.7a.1 | ||||||||
| K07E3.7a.2 | |||||||||
| K07E3.7a.3 | |||||||||
| K07E3.7a.4 | |||||||||
| K07E3.7c.1 | |||||||||
| Other_sequence | JI460628.1 | ||||||||
| Associated_feature | WBsf670809 | ||||||||
| WBsf670810 | |||||||||
| WBsf1006050 | |||||||||
| WBsf1023361 | |||||||||
| WBsf237646 | |||||||||
| WBsf237647 | |||||||||
| WBsf237648 | |||||||||
| WBsf237649 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00113893 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00016733 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00016734 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034077 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00050170 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr8802 | ||||||||
| Expr14600 | |||||||||
| Expr14601 | |||||||||
| Expr14612 | |||||||||
| Expr1022695 | |||||||||
| Expr1038425 | |||||||||
| Expr1153865 | |||||||||
| Expr2009732 | |||||||||
| Expr2027972 | |||||||||
| Drives_construct | WBCnstr00013536 | ||||||||
| WBCnstr00025798 | |||||||||
| WBCnstr00041177 | |||||||||
| Construct_product | WBCnstr00013536 | ||||||||
| WBCnstr00025798 | |||||||||
| WBCnstr00041177 | |||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (119) | |||||||||
| Interaction | WBInteraction000042217 | ||||||||
| WBInteraction000139592 | |||||||||
| WBInteraction000139626 | |||||||||
| WBInteraction000322963 | |||||||||
| WBInteraction000327485 | |||||||||
| WBInteraction000389798 | |||||||||
| WBInteraction000444000 | |||||||||
| WBInteraction000456510 | |||||||||
| WBInteraction000460521 | |||||||||
| WBInteraction000470946 | |||||||||
| Map_info | Map | X | Position | -0.554868 | Error | 0.011165 | |||
| Positive | Positive_clone | K07E3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00035239 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00053837 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060223 | |||||||||
| WBPaper00060660 | |||||||||
| WBPaper00063155 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
