WormBase Tree Display for Gene: WBGene00019543
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WBGene00019543 | SMap | S_parent | Sequence | K08F11 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | cif-1 | Paper_evidence | WBPaper00029237 | |||
Sequence_name | K08F11.3 | ||||||
Molecular_name | K08F11.3 | ||||||
K08F11.3.1 | |||||||
CE11954 | |||||||
K08F11.3.2 | |||||||
Other_name | CELE_K08F11.3 | Accession_evidence | NDB | BX284604 | |||
Public_name | cif-1 | ||||||
DB_info | Database | AceView | gene | 4F472 | |||
WormQTL | gene | WBGene00019543 | |||||
WormFlux | gene | WBGene00019543 | |||||
NDB | locus_tag | CELE_K08F11.3 | |||||
Panther | gene | CAEEL|WormBase=WBGene00019543|UniProtKB=Q94261 | |||||
family | PTHR15350 | ||||||
NCBI | gene | 177236 | |||||
RefSeq | protein | NM_068217.7 | |||||
SwissProt | UniProtAcc | Q94261 | |||||
TREEFAM | TREEFAM_ID | TF106148 | |||||
UniProt_GCRP | UniProtAcc | Q94261 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | cif | ||||||
Allele (49) | |||||||
Strain | WBStrain00036432 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (21) | |||||||
Contained_in_operon | CEOP4140 | ||||||
Ortholog (31) | |||||||
Structured_description | Automated_description | Predicted to enable translation initiation factor activity. Predicted to be involved in cytoplasmic translational initiation. Predicted to be located in cytoplasm. Predicted to be part of eukaryotic translation initiation factor 3 complex. Is an ortholog of human EIF3M (eukaryotic translation initiation factor 3 subunit M). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | K08F11.3 | |||||
Corresponding_transcript | K08F11.3.1 | ||||||
K08F11.3.2 | |||||||
Other_sequence (38) | |||||||
Associated_feature | WBsf667900 | ||||||
WBsf996375 | |||||||
WBsf996376 | |||||||
WBsf996377 | |||||||
WBsf1017302 | |||||||
WBsf1017303 | |||||||
WBsf229998 | |||||||
WBsf229999 | |||||||
Experimental_info | RNAi_result (13) | ||||||
Expr_pattern | Expr1028784 | ||||||
Expr1038446 | |||||||
Expr1154015 | |||||||
Expr2010013 | |||||||
Expr2028254 | |||||||
Microarray_results (23) | |||||||
Expression_cluster (128) | |||||||
Interaction (122) | |||||||
Map_info | Map | IV | Position | 0.68613 | Error | 0.002646 | |
Positive | Positive_clone | K08F11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00029237 | ||||||
WBPaper00038491 | |||||||
WBPaper00048416 | |||||||
WBPaper00049828 | |||||||
WBPaper00055090 | |||||||
WBPaper00061547 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |