WormBase Tree Display for Gene: WBGene00019703
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| WBGene00019703 | SMap | S_parent | Sequence | M01D1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxb-41 | Person_evidence | WBPerson655 | |||||
| Sequence_name | M01D1.8 | ||||||||
| Molecular_name | M01D1.8 | ||||||||
| M01D1.8.1 | |||||||||
| CE12256 | |||||||||
| Other_name | CELE_M01D1.8 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | fbxb-41 | ||||||||
| DB_info | Database | AceView | gene | 2B332 | |||||
| WormQTL | gene | WBGene00019703 | |||||||
| WormFlux | gene | WBGene00019703 | |||||||
| NDB | locus_tag | CELE_M01D1.8 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019703|UniProtKB=O17229 | |||||||
| family | PTHR22899 | ||||||||
| NCBI | gene | 173484 | |||||||
| RefSeq | protein | NM_061495.4 | |||||||
| TREEFAM | TREEFAM_ID | TF319367 | |||||||
| TrEMBL | UniProtAcc | O17229 | |||||||
| UniProt_GCRP | UniProtAcc | O17229 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Dec 2005 17:22:20 | WBPerson2970 | Name_change | CGC_name | fbxb-41 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxb | ||||||||
| Allele (76) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (28) | |||||||||
| Paralog (143) | |||||||||
| Structured_description | Concise_description | This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; its encoded protein also contains a Pfam-B45 motif of presently unknown function. | Paper_evidence | WBPaper00012854 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Enriched in several structures, including ABalpapppa; ABalppappa; cholinergic neurons; ciliated neurons; and pharyngeal cell based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and eat-2 based on microarray and RNA-seq studies. Is affected by sixteen chemicals including hydrogen sulfide; methylmercuric chloride; and rotenone based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain; F-box associated; and F-box associated domain, type 2. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | M01D1.8 | |||||||
| Corresponding_transcript | M01D1.8.1 | ||||||||
| Associated_feature | WBsf649842 | ||||||||
| WBsf986550 | |||||||||
| WBsf222657 | |||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern | Expr1038512 | ||||||||
| Expr1154438 | |||||||||
| Expr2011642 | |||||||||
| Expr2029881 | |||||||||
| Drives_construct | WBCnstr00025659 | ||||||||
| Construct_product | WBCnstr00025659 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (138) | |||||||||
| Interaction (26) | |||||||||
| Map_info | Map | II | Position | -15.5724 | |||||
| Positive | Positive_clone | M01D1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00012854 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
