WormBase Tree Display for Gene: WBGene00019705
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| WBGene00019705 | SMap | S_parent | Sequence | M01D1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxb-45 | Person_evidence | WBPerson655 | |||||
| Sequence_name | M01D1.10 | ||||||||
| Molecular_name | M01D1.10 | ||||||||
| M01D1.10.1 | |||||||||
| CE28609 | |||||||||
| Other_name | CELE_M01D1.10 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | fbxb-45 | ||||||||
| DB_info | Database | AceView | gene | 2B334 | |||||
| WormQTL | gene | WBGene00019705 | |||||||
| WormFlux | gene | WBGene00019705 | |||||||
| NDB | locus_tag | CELE_M01D1.10 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019705|UniProtKB=Q965L5 | |||||||
| family | PTHR22899 | ||||||||
| NCBI | gene | 173485 | |||||||
| RefSeq | protein | NM_061496.2 | |||||||
| TREEFAM | TREEFAM_ID | TF319367 | |||||||
| TrEMBL | UniProtAcc | Q965L5 | |||||||
| UniProt_GCRP | UniProtAcc | Q965L5 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Dec 2005 17:22:20 | WBPerson2970 | Name_change | CGC_name | fbxb-45 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxb | ||||||||
| Allele (72) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (31) | |||||||||
| Paralog (143) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ciliated neurons; germ line; male distal tip cell; pharyngeal neurons; and somatic gonad precursor based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and eat-2 based on microarray; tiling array; and RNA-seq studies. Is affected by fifteen chemicals including hydrogen sulfide; 1-methylnicotinamide; and methylmercuric chloride based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain; F-box associated; and F-box associated domain, type 2. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | M01D1.10 | |||||||
| Corresponding_transcript | M01D1.10.1 | ||||||||
| Associated_feature | WBsf649843 | ||||||||
| WBsf665345 | |||||||||
| WBsf665346 | |||||||||
| WBsf986551 | |||||||||
| WBsf222658 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00050736 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1013594 | ||||||||
| Expr1038514 | |||||||||
| Expr1154434 | |||||||||
| Expr2011646 | |||||||||
| Expr2029885 | |||||||||
| Drives_construct | WBCnstr00025657 | ||||||||
| Construct_product | WBCnstr00025657 | ||||||||
| Microarray_results (11) | |||||||||
| Expression_cluster (139) | |||||||||
| Map_info | Map | II | Position | -15.5719 | |||||
| Positive | Positive_clone | M01D1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
