WormBase Tree Display for Gene: WBGene00019801
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| WBGene00019801 | SMap | S_parent | Sequence | PAR2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | aak-1 | Paper_evidence | WBPaper00024628 | |||||
| Sequence_name | PAR2.3 | ||||||||
| Molecular_name | PAR2.3a | ||||||||
| PAR2.3a.1 | |||||||||
| CE39167 | |||||||||
| PAR2.3b | |||||||||
| CE39168 | |||||||||
| PAR2.3b.1 | |||||||||
| Other_name | AMPK | Paper_evidence | WBPaper00035954 | ||||||
| CELE_PAR2.3 | Accession_evidence | NDB | BX284603 | ||||||
| Public_name | aak-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 25 Jan 2005 16:32:44 | WBPerson2970 | Name_change | CGC_name | aak-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | aak | ||||||||
| Allele (53) | |||||||||
| Strain | WBStrain00000096 | ||||||||
| WBStrain00047359 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (19) | |||||||||
| Contained_in_operon | CEOP3539 | ||||||||
| Ortholog (39) | |||||||||
| Paralog (19) | |||||||||
| Structured_description | Concise_description | aak-1 encodes one of two C. elegans homologs of the catalytic alpha subunit of AMP-activated protein kinases (AMPKs); aak-1 activity is required, in parallel with aak-2 and downstream of daf-2, daf-7, and par-4, for negative regulation of germline proliferation during dauer development. | Paper_evidence | WBPaper00024886 | |||||
| WBPaper00027027 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 08 Mar 2006 00:00:00 | ||||||||
| Automated_description | Predicted to enable protein serine/threonine kinase activity. Involved in negative regulation of cell population proliferation and pharyngeal pumping. Predicted to be part of nucleotide-activated protein kinase complex. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | PAR2.3a | |||||||
| PAR2.3b | |||||||||
| Corresponding_CDS_history | PAR2.3a:wp142 | ||||||||
| PAR2.3a:wp149 | |||||||||
| PAR2.3b:wp142 | |||||||||
| PAR2.3b:wp149 | |||||||||
| Corresponding_transcript | PAR2.3a.1 | ||||||||
| PAR2.3b.1 | |||||||||
| Other_sequence | CBC01670_1 | ||||||||
| CJC06326_1 | |||||||||
| CR08498 | |||||||||
| CRC02322_1 | |||||||||
| Associated_feature | WBsf993454 | ||||||||
| Experimental_info | RNAi_result (18) | ||||||||
| Expr_pattern | Expr1022262 | ||||||||
| Expr1038574 | |||||||||
| Expr1154792 | |||||||||
| Expr2009052 | |||||||||
| Expr2027288 | |||||||||
| Drives_construct | WBCnstr00025588 | ||||||||
| WBCnstr00042176 | |||||||||
| Construct_product | WBCnstr00025588 | ||||||||
| WBCnstr00042176 | |||||||||
| Regulate_expr_cluster | WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated | ||||||||
| WBPaper00056471:aak-1(tm1944);aak-2(ok524)_upregulated | |||||||||
| Microarray_results (27) | |||||||||
| Expression_cluster (123) | |||||||||
| Interaction (61) | |||||||||
| WBProcess | WBbiopr:00000121 | ||||||||
| Map_info | Map | III | Position | -0.061654 | Error | 0.002372 | |||
| Positive | Positive_clone | PAR2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5287 | |||||||
| 4763 | |||||||||
| Pseudo_map_position | |||||||||
| Reference (122) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
