WormBase Tree Display for Gene: WBGene00019882
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| WBGene00019882 | SMap | S_parent | Sequence | R05D3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R05D3.9 | |||||||
| Molecular_name | R05D3.9 | ||||||||
| R05D3.9.1 | |||||||||
| CE31049 | |||||||||
| Other_name | CELE_R05D3.9 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | R05D3.9 | ||||||||
| DB_info | Database | AceView | gene | 3J452 | |||||
| WormQTL | gene | WBGene00019882 | |||||||
| WormFlux | gene | WBGene00019882 | |||||||
| NDB | locus_tag | CELE_R05D3.9 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019882|UniProtKB=P34542 | |||||||
| family | PTHR22699 | ||||||||
| NCBI | gene | 176181 | |||||||
| RefSeq | protein | NM_066444.8 | |||||||
| SwissProt | UniProtAcc | P34542 | |||||||
| UniProt_GCRP | UniProtAcc | P34542 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (72) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (30) | |||||||||
| Paralog (13) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including DB neuron; anterior hypodermis; gonadal sheath cell; interfacial epithelial cell; and rectal gland cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray; proteomic; tiling array; and RNA-seq studies. Is affected by twelve chemicals including Psoralens; allantoin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Thioredoxin domain-containing protein 16 and Thioredoxin-like superfamily. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R05D3.9 | |||||||
| Corresponding_transcript | R05D3.9.1 | ||||||||
| Other_sequence | CJC01932_1 | ||||||||
| CRC05730_1 | |||||||||
| CR01288 | |||||||||
| Associated_feature | WBsf651270 | ||||||||
| WBsf667153 | |||||||||
| WBsf993324 | |||||||||
| WBsf993325 | |||||||||
| WBsf1015413 | |||||||||
| WBsf227127 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00005421 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017434 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00005412 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051292 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034605 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00017427 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051291 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00002221 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022688 | ||||||||
| Expr1038625 | |||||||||
| Expr1154985 | |||||||||
| Expr2005393 | |||||||||
| Expr2023614 | |||||||||
| Drives_construct | WBCnstr00025524 | ||||||||
| Construct_product | WBCnstr00025524 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (144) | |||||||||
| Interaction (25) | |||||||||
| Map_info | Positive | Positive_clone | R05D3 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | -0.278532 | |||||||
| Method | Gene |
