WormBase Tree Display for Gene: WBGene00019956
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| WBGene00019956 | SMap | S_parent | Sequence | R08C7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | fbxb-75 | Person_evidence | WBPerson655 | |||||
| Sequence_name | R08C7.13 | ||||||||
| Molecular_name | R08C7.13 | ||||||||
| R08C7.13.1 | |||||||||
| CE33680 | |||||||||
| Other_name | CELE_R08C7.13 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | fbxb-75 | ||||||||
| DB_info | Database | AceView | gene | 4F204 | |||||
| WormQTL | gene | WBGene00019956 | |||||||
| WormFlux | gene | WBGene00019956 | |||||||
| NDB | locus_tag | CELE_R08C7.13 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00019956|UniProtKB=Q86MH2 | |||||||
| family | PTHR22899 | ||||||||
| NCBI | gene | 3565845 | |||||||
| RefSeq | protein | NM_001028160.7 | |||||||
| TrEMBL | UniProtAcc | Q86MH2 | |||||||
| UniProt_GCRP | UniProtAcc | Q86MH2 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 12 Dec 2005 17:22:20 | WBPerson2970 | Name_change | CGC_name | fbxb-75 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | fbxb | ||||||||
| Allele (16) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (40) | |||||||||
| Paralog (143) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABalaappppa; ABalapaappa; ABalapappaa; CEP socket cell; and amphid neurons based on tiling array and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on tiling array; microarray; and RNA-seq studies. Is affected by fifteen chemicals including hydrogen sulfide; methylmercuric chloride; and rotenone based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: F-box domain; F-box associated; and F-box associated domain, type 2. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R08C7.13 | |||||||
| Corresponding_transcript | R08C7.13.1 | ||||||||
| Associated_feature | WBsf651731 | ||||||||
| WBsf667879 | |||||||||
| WBsf667880 | |||||||||
| WBsf229962 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00051533 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1038666 | ||||||||
| Expr1155210 | |||||||||
| Expr2011676 | |||||||||
| Expr2029915 | |||||||||
| Drives_construct | WBCnstr00025469 | ||||||||
| Construct_product | WBCnstr00025469 | ||||||||
| Microarray_results | A_12_P109900 | ||||||||
| GPL19516_CGZ0031410 | |||||||||
| GPL21109_R08C7.13 | |||||||||
| GPL8304_CE_WBGene00019956_A | |||||||||
| GPL8673_R08C7_13P00132 | |||||||||
| GPL8673_R08C7_13P00511 | |||||||||
| GPL8673_R08C7_13P00743 | |||||||||
| Expression_cluster (124) | |||||||||
| Interaction | WBInteraction000030809 | ||||||||
| Map_info | Map | IV | Position | 0.264558 | Error | 0.004251 | |||
| Positive | Positive_clone | R08C7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
