WormBase Tree Display for Gene: WBGene00019987

WBGene00019987 SMap: S_parent: Sequence: R09F10
  Identity: Version: 1
    Name: Sequence_name: R09F10.3
      Molecular_name: R09F10.3
        R09F10.3.1
        CE33810
      Other_name: CELE_R09F10.3 Accession_evidence: NDB BX284606
      Public_name: R09F10.3
    DB_info: Database: AceView gene XI913
        WormQTL gene WBGene00019987
        WormFlux gene WBGene00019987
        NDB locus_tag CELE_R09F10.3
        NCBI gene 181085
        RefSeq protein NM_077000.6
        TREEFAM TREEFAM_ID TF343820
        TrEMBL UniProtAcc Q23026
        UniProt_GCRP UniProtAcc Q23026
    Species: Caenorhabditis elegans
    History: Version_change: 1 28 May 2004 13:31:02 WBPerson1971 Event: Imported: Initial conversion from CDS class of stlace from WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (37)
    RNASeq_FPKM (74)
    GO_annotation: 00077035
      00077036
      00124717
    Contained_in_operon: CEOPX096
    Ortholog (25)
    Structured_description: Automated_description: Predicted to be located in nucleus. Predicted to be part of mediator complex. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R09F10.3
    Corresponding_CDS_history: R09F10.3:wp98
    Corresponding_transcript: R09F10.3.1
    Other_sequence: JI169342.1
      Tcol_isotig13698
    Associated_feature: WBsf236039
      WBsf236040
      WBsf236041
  Experimental_info: RNAi_result: WBRNAi00051637 Inferred_automatically: RNAi_primary
      WBRNAi00007419 Inferred_automatically: RNAi_primary
      WBRNAi00017660 Inferred_automatically: RNAi_primary
      WBRNAi00034788 Inferred_automatically: RNAi_primary
      WBRNAi00008241 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1016627
      Expr1038679
      Expr1155308
      Expr2005520
      Expr2023739
    Drives_construct: WBCnstr00025446
    Construct_product: WBCnstr00025446
    Microarray_results (20)
    Expression_cluster (118)
    SAGE_tag: SAGE:gctccaactgaggattg Strand: Sense
        Unambiguously_mapped
      SAGE:atgccattaagaggtgt Strand: Sense
        Unambiguously_mapped
      SAGE:agattgtagtgaaaaac Strand: Antisense
      SAGE:gaacaaagtt Strand: Antisense
      SAGE:atgccattaa Strand: Sense
        Unambiguously_mapped
      SAGE:atgttgatgt Strand: Antisense
      SAGE:tttatactttgccagaa Strand: Sense
        Unambiguously_mapped
      SAGE:agattgtagt Strand: Antisense
      SAGE:tttatacttt Strand: Sense
        Unambiguously_mapped
      SAGE:cgaatttgtt Strand: Antisense
    Interaction: WBInteraction000561254
  Map_info: Positive: Positive_clone: R09F10 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: X -0.188116
  Reference: WBPaper00060132
  Method: Gene