WormBase Tree Display for Gene: WBGene00020008
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WBGene00020008 | SMap | S_parent | Sequence | R11F4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | R11F4.2 | |||||||
Molecular_name | R11F4.2a | ||||||||
R11F4.2a.1 | |||||||||
CE33433 | |||||||||
R11F4.2b | |||||||||
CE36007 | |||||||||
R11F4.2b.1 | |||||||||
Other_name | R11F4.b | Curator_confirmed | WBPerson1983 | ||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
CELE_R11F4.2 | Accession_evidence | NDB | BX284602 | ||||||
Public_name | R11F4.2 | ||||||||
DB_info | Database | AceView | gene | 2E375 | |||||
WormQTL | gene | WBGene00020008 | |||||||
WormFlux | gene | WBGene00020008 | |||||||
NDB | locus_tag | CELE_R11F4.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00020008|UniProtKB=Q7JPB1 | |||||||
family | PTHR46709 | ||||||||
NCBI | gene | 173746 | |||||||
RefSeq | protein | NM_001027111.5 | |||||||
NM_001027112.5 | |||||||||
TREEFAM | TREEFAM_ID | TF315321 | |||||||
TrEMBL | UniProtAcc | Q7JPB1 | |||||||
H2L0J7 | |||||||||
UniProt_GCRP | UniProtAcc | Q7JPB1 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (68) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00023131 | ||||||||
00124734 | |||||||||
00124735 | |||||||||
00124736 | |||||||||
Ortholog (27) | |||||||||
Paralog (187) | |||||||||
Structured_description | Automated_description | Predicted to enable G protein-coupled receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway. Predicted to be located in membrane. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | R11F4.2a | |||||||
R11F4.2b | |||||||||
Corresponding_CDS_history | R11F4.2:wp94 | ||||||||
Corresponding_transcript | R11F4.2a.1 | ||||||||
R11F4.2b.1 | |||||||||
Other_sequence | JI211724.1 | ||||||||
FC548683.1 | |||||||||
Acan_isotig04587 | |||||||||
ACC17653_1 | |||||||||
Dviv_isotig27263 | |||||||||
Acan_isotig04586 | |||||||||
Dviv_isotig23048 | |||||||||
Associated_feature | WBsf657440 | ||||||||
WBsf987480 | |||||||||
WBsf987481 | |||||||||
WBsf987482 | |||||||||
WBsf987483 | |||||||||
WBsf987484 | |||||||||
WBsf1012024 | |||||||||
WBsf1012025 | |||||||||
WBsf1012026 | |||||||||
WBsf221082 | |||||||||
Experimental_info | RNAi_result | WBRNAi00001364 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00034864 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00051796 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00017756 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1022388 | ||||||||
Expr1038689 | |||||||||
Expr1155457 | |||||||||
Expr2005590 | |||||||||
Expr2023808 | |||||||||
Drives_construct | WBCnstr00025436 | ||||||||
Construct_product | WBCnstr00025436 | ||||||||
Microarray_results (24) | |||||||||
Expression_cluster (93) | |||||||||
Interaction (12) | |||||||||
Map_info | Positive | Positive_clone | R11F4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | -5.63108 | |||||||
Method | Gene |