WormBase Tree Display for Gene: WBGene00020014
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WBGene00020014 | SMap | S_parent | Sequence | R11G11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | srlf-19 | Person_evidence | WBPerson260 | |||||
Laboratory_evidence | OH | ||||||||
Sequence_name | R11G11.6 | ||||||||
Molecular_name | R11G11.6 | ||||||||
R11G11.6.1 | |||||||||
CE12750 | |||||||||
Other_name | R11G11.6 | ||||||||
CELE_R11G11.6 | Accession_evidence | NDB | BX284605 | ||||||
Public_name | srlf-19 | ||||||||
DB_info | Database | AceView | gene | 5A981 | |||||
WormQTL | gene | WBGene00020014 | |||||||
WormFlux | gene | WBGene00020014 | |||||||
NDB | locus_tag | CELE_R11G11.6 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00020014|UniProtKB=O16949 | |||||||
family | PTHR21593 | ||||||||
NCBI | gene | 187825 | |||||||
RefSeq | protein | NM_070825.4 | |||||||
TREEFAM | TREEFAM_ID | TF316074 | |||||||
TrEMBL | UniProtAcc | O16949 | |||||||
UniProt_GCRP | UniProtAcc | O16949 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
2 | 03 Oct 2022 15:59:20 | WBPerson21950 | Name_change | CGC_name | srlf-19 | ||||
Other_name | R11G11.6 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | srlf | ||||||||
Allele (40) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | WBGene00145028 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||
WBGene00070712 | Caenorhabditis remanei | From_analysis | TreeFam | ||||||
WBGene00108185 | Pristionchus pacificus | From_analysis | Inparanoid_8 | ||||||
CBOVI.g8112 | Caenorhabditis bovis | From_analysis | WormBase-Compara | ||||||
CSP31.g7841 | Caenorhabditis uteleia | From_analysis | WormBase-Compara | ||||||
chrV_pilon.g13022 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Paralog (39) | |||||||||
Structured_description | Automated_description | Enriched in OLL; PVD; and pharyngeal muscle cell based on microarray and tiling array studies. Is affected by several genes including daf-16; daf-2; and dpy-10 based on microarray; tiling array; and RNA-seq studies. Is affected by twelve chemicals including 1-methylnicotinamide; methylmercuric chloride; and Tunicamycin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: SXP/RAL-2 family protein Ani s 5-like, metal-binding domain and SXP/RAL-2 family protein Ani s 5-like, cation-binding domain. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | R11G11.6 | |||||||
Corresponding_transcript | R11G11.6.1 | ||||||||
Associated_feature | WBsf999176 | ||||||||
WBsf1019082 | |||||||||
Experimental_info | RNAi_result | WBRNAi00051816 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00034872 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00017775 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1015130 | ||||||||
Expr1155476 | |||||||||
Expr2005599 | |||||||||
Expr2023816 | |||||||||
Drives_construct | WBCnstr00025430 | ||||||||
Construct_product | WBCnstr00025430 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (140) | |||||||||
Interaction (186) | |||||||||
Map_info | Positive | Positive_clone | R11G11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | -19.9854 | |||||||
Method | Gene |