WormBase Tree Display for Gene: WBGene00020040
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WBGene00020040 | SMap | S_parent | Sequence | R12E2 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Allele (14) | ||||||
RNASeq_FPKM (74) | ||||||
Ortholog | WBGene00033064 | Caenorhabditis briggsae | From_analysis | OMA | ||
WBGene00033066 | Caenorhabditis briggsae | From_analysis | OMA | |||
WBGene00033065 | Caenorhabditis briggsae | From_analysis | OMA | |||
WBGene00062342 | Caenorhabditis remanei | From_analysis | OMA | |||
WBGene00083072 | Caenorhabditis remanei | From_analysis | OMA | |||
WBGene00142181 | Caenorhabditis brenneri | From_analysis | OMA | |||
WBGene00062340 | Caenorhabditis remanei | From_analysis | OMA | |||
chrI_pilon.g647 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Structured_description | Automated_description | Enriched in several structures, including carbon dioxide sensory neurons; cholinergic neurons; germline precursor cell; pharyngeal muscle cell; and tail hypodermis based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and tiling array studies. Is affected by thirty-three chemicals including hydrogen sulfide; methylmercury hydroxide; and 1-methylnicotinamide based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | R12E2.15 | ||||
Corresponding_transcript | R12E2.15.1 | |||||
R12E2.15.2 | ||||||
Associated_feature | WBsf649079 | |||||
WBsf983346 | ||||||
WBsf1009627 | ||||||
WBsf219245 | ||||||
Experimental_info | RNAi_result | WBRNAi00051852 | Inferred_automatically | RNAi_primary | ||
WBRNAi00004085 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00034891 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern | Expr1022519 | |||||
Expr1038710 | ||||||
Expr1155511 | ||||||
Expr2005617 | ||||||
Expr2023834 | ||||||
Drives_construct | WBCnstr00025409 | |||||
Construct_product | WBCnstr00025409 | |||||
Microarray_results (19) | ||||||
Expression_cluster (291) | ||||||
Interaction (149) | ||||||
Map_info | Positive | Positive_clone | R12E2 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | I | -1.69657 | ||||
Reference | WBPaper00064623 | |||||
Method | Gene |