WormBase Tree Display for Gene: WBGene00020040
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WBGene00020040 | SMap | S_parent | Sequence | R12E2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name (4) | |||||||||
DB_info | Database | AceView | gene | 1E716 | |||||
WormQTL | gene | WBGene00020040 | |||||||
WormFlux | gene | WBGene00020040 | |||||||
NDB | locus_tag | CELE_R12E2.15 | |||||||
NCBI | gene | 172000 | |||||||
RefSeq | protein | NM_001392100.1 | |||||||
TrEMBL | UniProtAcc | O61781 | |||||||
UniProt_GCRP | UniProtAcc | O61781 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (14) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | WBGene00033064 | Caenorhabditis briggsae | From_analysis | OMA | |||||
WBGene00033066 | Caenorhabditis briggsae | From_analysis | OMA | ||||||
WBGene00033065 | Caenorhabditis briggsae | From_analysis | OMA | ||||||
WBGene00062342 | Caenorhabditis remanei | From_analysis | OMA | ||||||
WBGene00083072 | Caenorhabditis remanei | From_analysis | OMA | ||||||
WBGene00142181 | Caenorhabditis brenneri | From_analysis | OMA | ||||||
WBGene00062340 | Caenorhabditis remanei | From_analysis | OMA | ||||||
chrI_pilon.g647 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Automated_description | Enriched in several structures, including carbon dioxide sensory neurons; cholinergic neurons; germline precursor cell; pharyngeal muscle cell; and tail hypodermis based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and tiling array studies. Is affected by thirty-three chemicals including hydrogen sulfide; methylmercury hydroxide; and 1-methylnicotinamide based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | R12E2.15 | |||||||
Corresponding_transcript | R12E2.15.1 | ||||||||
R12E2.15.2 | |||||||||
Associated_feature | WBsf649079 | ||||||||
WBsf983346 | |||||||||
WBsf1009627 | |||||||||
WBsf219245 | |||||||||
Experimental_info | RNAi_result | WBRNAi00051852 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00004085 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00034891 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1022519 | ||||||||
Expr1038710 | |||||||||
Expr1155511 | |||||||||
Expr2005617 | |||||||||
Expr2023834 | |||||||||
Drives_construct | WBCnstr00025409 | ||||||||
Construct_product | WBCnstr00025409 | ||||||||
Microarray_results (19) | |||||||||
Expression_cluster (291) | |||||||||
Interaction (149) | |||||||||
Map_info | Positive | Positive_clone | R12E2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | I | -1.69657 | |||||||
Reference | WBPaper00064623 | ||||||||
Method | Gene |