WormBase Tree Display for Gene: WBGene00020091
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| WBGene00020091 | SMap | S_parent | Sequence | R119 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | rnp-8 | Person_evidence | WBPerson421 | |||||
| WBPerson3565 | |||||||||
| WBPerson320 | |||||||||
| Sequence_name | R119.7 | ||||||||
| Molecular_name | R119.7a | ||||||||
| R119.7a.1 | |||||||||
| CE18161 | |||||||||
| R119.7b | |||||||||
| CE49206 | |||||||||
| R119.7b.1 | |||||||||
| R119.7b.2 | |||||||||
| R119.7b.3 | |||||||||
| Other_name | CELE_R119.7 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | rnp-8 | ||||||||
| DB_info | Database | AceView | gene | 1A841 | |||||
| WormQTL | gene | WBGene00020091 | |||||||
| WormFlux | gene | WBGene00020091 | |||||||
| NDB | locus_tag | CELE_R119.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020091|UniProtKB=O61711 | |||||||
| family | PTHR13798 | ||||||||
| NCBI | gene | 171627 | |||||||
| RefSeq | protein | NM_001393194.1 | |||||||
| NM_058323.5 | |||||||||
| TrEMBL | UniProtAcc | O61711 | |||||||
| V6CLS0 | |||||||||
| UniProt_GCRP | UniProtAcc | O61711 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 01 Feb 2007 16:39:55 | WBPerson2970 | Name_change | CGC_name | rnp-8 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rnp | ||||||||
| Allele (87) | |||||||||
| Strain | WBStrain00022641 | ||||||||
| WBStrain00022645 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (12) | |||||||||
| Ortholog (27) | |||||||||
| Paralog | WBGene00012558 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00044897 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enables enzyme binding activity; poly(G) binding activity; and polynucleotide adenylyltransferase activator activity. Predicted to be involved in regulation of alternative mRNA splicing, via spliceosome. Located in protein-containing complex. Expressed in germ line and oocyte. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R119.7a | |||||||
| R119.7b | |||||||||
| Corresponding_transcript | R119.7a.1 | ||||||||
| R119.7b.1 | |||||||||
| R119.7b.2 | |||||||||
| R119.7b.3 | |||||||||
| Other_sequence | CRC04434_1 | ||||||||
| CBC08210_1 | |||||||||
| CRC06570_1 | |||||||||
| CR04603 | |||||||||
| CBC11033_1 | |||||||||
| CR04186 | |||||||||
| CJC15941_1 | |||||||||
| Associated_feature | WBsf980923 | ||||||||
| WBsf982477 | |||||||||
| WBsf982478 | |||||||||
| WBsf1009074 | |||||||||
| WBsf217124 | |||||||||
| WBsf217125 | |||||||||
| WBsf217126 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00102116 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00008174 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004076 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022540 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007259 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051755 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022692 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00069466 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00001039 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034845 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr8615 | ||||||||
| Expr8616 | |||||||||
| Expr8617 | |||||||||
| Expr8618 | |||||||||
| Expr11617 | |||||||||
| Expr1028515 | |||||||||
| Expr1038730 | |||||||||
| Expr1155420 | |||||||||
| Expr2015397 | |||||||||
| Expr2033631 | |||||||||
| Regulate_expr_cluster | WBPaper00037611:RNP-8-associated | ||||||||
| Antibody | WBAntibody00001926 | ||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (152) | |||||||||
| Interaction (224) | |||||||||
| Map_info | Map | I | Position | -19.0609 | Error | 0.002776 | |||
| Positive | Positive_clone | R119 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00033205 | ||||||||
| WBPaper00034772 | |||||||||
| WBPaper00037611 | |||||||||
| WBPaper00048471 | |||||||||
| WBPaper00049695 | |||||||||
| WBPaper00060306 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
