WormBase Tree Display for Gene: WBGene00020152
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| WBGene00020152 | SMap | S_parent | Sequence | T01G6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | nhr-211 | Person_evidence | WBPerson600 | |||||
| Sequence_name | T01G6.5 | ||||||||
| Molecular_name | T01G6.5 | ||||||||
| T01G6.5.1 | |||||||||
| CE12998 | |||||||||
| Other_name | CELE_T01G6.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | nhr-211 | ||||||||
| DB_info | Database | AceView | gene | 5A965 | |||||
| WormQTL | gene | WBGene00020152 | |||||||
| WormFlux | gene | WBGene00020152 | |||||||
| NDB | locus_tag | CELE_T01G6.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00020152|UniProtKB=O16965 | |||||||
| family | PTHR45680 | ||||||||
| NCBI | gene | 187963 | |||||||
| RefSeq | protein | NM_070817.2 | |||||||
| TrEMBL | UniProtAcc | O16965 | |||||||
| UniProt_GCRP | UniProtAcc | O16965 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:02 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 22 Jul 2005 10:29:12 | WBPerson2970 | Name_change | CGC_name | nhr-211 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | nhr | ||||||||
| Allele (112) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00029047 | ||||||||
| 00029048 | |||||||||
| 00029049 | |||||||||
| 00029050 | |||||||||
| 00124858 | |||||||||
| 00124859 | |||||||||
| 00124860 | |||||||||
| 00124861 | |||||||||
| Contained_in_operon | CEOP5020 | ||||||||
| Ortholog (51) | |||||||||
| Paralog (217) | |||||||||
| Structured_description | Automated_description | Predicted to enable DNA-binding transcription factor activity; sequence-specific DNA binding activity; and zinc ion binding activity. Predicted to be involved in regulation of DNA-templated transcription. Predicted to be located in nucleus. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T01G6.5 | |||||||
| Corresponding_transcript | T01G6.5.1 | ||||||||
| Associated_feature | WBsf661100 | ||||||||
| WBsf978610 | |||||||||
| WBsf999173 | |||||||||
| WBsf1019080 | |||||||||
| Transcription_factor | WBTranscriptionFactor000443 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00035027 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00052152 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1024232 | ||||||||
| Expr1155787 | |||||||||
| Expr2014115 | |||||||||
| Expr2032354 | |||||||||
| Drives_construct | WBCnstr00025339 | ||||||||
| Construct_product | WBCnstr00016842 | ||||||||
| WBCnstr00025339 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (100) | |||||||||
| Map_info | Map | V | Position | -19.988 | |||||
| Positive | Positive_clone | T01G6 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 5347 | |||||||
| 5367 | |||||||||
| 5039 | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027309 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
